Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1740 ATGTCGTTAGTCGGGCCATCCGATCCATCTCCGTTATCATACGGAAGTCGCAAGCTTTACTCGTTGAAGGGAACCAAGAATGCTCCTGACTTGTCCACACAAAGATTTGGCTCTGAAAAGCATAGGACGATGTATATGAATGATTCATATTGCAGTGAGAGCTATGAGAAGTATTTCCTCGACTTCCCGATAGAAGAGTTGTCGATTTCTGGCATTTCTACCAATTCTTTTCACCAGAACACTGCTTCATTTGGGCTAAGGGCTGATTCTTTATCCCCCTTGTGTGATTCATTTACACCTTTTGATGCTTATCAATCAAACTCGGACTCAGCTTGCCTTGAGAGTACAAGTCTAGAACAGCTGGATTTTGAGGATGATCAAGTGAGACTGAAGTTGCAAGAATTGGAGAGAGATCTGCTGGGTGACCTCGATGCGGCTGACTACGAGGACGAGATGTTTGCAAATGGCCAGAGCATGGAAATCGATAGCGAATGGGCAAATTCAATTCGAGATGCACTGCTTCATGATTCGCCAAAAGAATCGTCATCGACGGATTCTAATTTCAGTACTACCAGCAGCAATAAAGATGCATCTCAGATATCTTCACAGAATCTCAGACAAATGCTTTTAGAATGTGCTTCTGCTATCTCAGAAGGGAACTTTGAAGAAGCATCAGCCATGATAGAACAGCTCCGAGGCATGGTCTCGGTTCAGGGAGAACCGTCACAAAGGATTGCAGCGTATATGGTAGAAGGTCTCGCTGCTCGGATGTTTGAATCGGGAAAATGTCTTTACAAAGCGTTAAGATGCAAAGAACCCCCTTCCTCCGATCGTCTCGCAGCTATGCAGATCCTTTTTGAGGTCTGCCCCTGTTTCAAATTTGGCTTTATGGCTGCAAATTGTGCCATTATCGAGGCAGCGAAAGATGAGAAGAAGATTCACATAATCGATTTCGATGTAAGCCAAGGAACTCAGTACATAAAATTGATTCAGATGCTAGCAGCTCAGCCAGGTAAACCACCACACTTGAGGTTAACTGGTGTTGATGACCCCGAGTCGGTTCAGCGCCCCGTTGGAGGTCTTAGACACATTGGACAAAGACTCGAGCAACTGGCAAAAGCGCTGCGAGTTCCATTTGAATTTCGCGCGATTGCCTCTAACGCTTCAGATGTCACTCCCTCGATGCTTGCCTCCCGGCCCGGAGAAGCACTCGTCGTAAACTTCGCTTTTCTACTTCACCACATGCCAGATGAAAGCGTTTCAACCGTAAATATACGAGACAGGCTTCTCCGAATGGTTAAGAGCCTGAACCCAAAACTAGTAACAGTCGTCGAACAGGACATGAATGCAAATACCACCCCGTTCTTCACAAGATTCGTCGAAACCTACAACTACTACGCAGCTGTTTACGACTCTCTTGATGCAACACTCCCAAGAGATAGTCAAGACAGAATAAATGTAGAAAGACAGTGCTTGGCAAAGGACATAGTCAACATTGTAGCTTGTGAAGGTGAAGAAAGAGTAGAGAGATACGAAGTCGCCGGGAAATGGCGGGCAAGAATGTCGATGGCTGGCTTCACTTCTTGTTCGATGAGCCAGAACGTGACCGACCCGATCCGTAAACTTATCGAGGAGGAGTATTGCGACCGATTCAAGATGTACGAGGAAATGGGCACACTCCATTTTGGATGGGAAGAGAAAAGCTTGATTGTTACATCAGCATGGAGGTAA 1731 45.81 MSLVGPSDPSPLSYGSRKLYSLKGTKNAPDLSTQRFGSEKHRTMYMNDSYCSESYEKYFLDFPIEELSISGISTNSFHQNTASFGLRADSLSPLCDSFTPFDAYQSNSDSACLESTSLEQLDFEDDQVRLKLQELERDLLGDLDAADYEDEMFANGQSMEIDSEWANSIRDALLHDSPKESSSTDSNFSTTSSNKDASQISSQNLRQMLLECASAISEGNFEEASAMIEQLRGMVSVQGEPSQRIAAYMVEGLAARMFESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKKIHIIDFDVSQGTQYIKLIQMLAAQPGKPPHLRLTGVDDPESVQRPVGGLRHIGQRLEQLAKALRVPFEFRAIASNASDVTPSMLASRPGEALVVNFAFLLHHMPDESVSTVNIRDRLLRMVKSLNPKLVTVVEQDMNANTTPFFTRFVETYNYYAAVYDSLDATLPRDSQDRINVERQCLAKDIVNIVACEGEERVERYEVAGKWRARMSMAGFTSCSMSQNVTDPIRKLIEEEYCDRFKMYEEMGTLHFGWEEKSLIVTSAWR 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16264994 16266724 + Lag0038378.1 Lac2g1740 599004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1740 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 189 575 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Lac2g1740 576 MobiDBLite consensus disorder prediction 176 198 - -
Lac2g1740 576 Pfam GRAS domain family 205 576 IPR005202 -
Lac2g1740 576 MobiDBLite consensus disorder prediction 179 198 - -
Lac2g1740 576 Coils Coil 118 138 - -
Lac2g1740 576 ProSiteProfiles GRAS family profile. 196 576 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g3111 Lac-Chr10:45491599 Lac2g1740 Lac-Chr2:16264994 1.60E-58 dispersed
Lac11g0059 Lac-Chr11:503056 Lac2g1740 Lac-Chr2:16264994 2.10E-77 dispersed
Lac2g1740 Lac-Chr2:16264994 Lac9g1970 Lac-Chr9:39446838 5.90E-114 dispersed
Lac2g1740 Lac-Chr2:16264994 Lac7g2743 Lac-Chr7:46582653 8.40E-60 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23520 PF03514 GRAS 1.50E-132 CL0063 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1740 K27748 - csv:101206511 1032.71