Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g1826 ATGGAGGAGAAAGAGGGAGTTGATTTCGGGTTTGCAGTAAAAGTGAGCCAAGCTCCAGAGAGCTTCGGGATGATGGATTCGAGACCTGAAAATACAAGCACAGAAAGCGAGCCGACGCCGGCGGCGGCGGAAGTAGCTCTGACACCGGCGGTGGCTACAAATGGAAAGAAGAAAAGAGGGAGGCCGAGAAAGTACGGCCCCGATGGGACTGTAGCGCCAACATTGTCGCCAATGCCCATTTCGTCGTCAATTCCGCTGACCGGAGAGTTTCCGGGTTGGAAACGGGGAAGAGGTCGGTCAGTAGAGTCGATTAAGAAGTCGCGGAAGTTCGATTATGAGATTCCAGGTAACAAGGTTGCCTTCTTTGCTGGAGCAGATTTCACACCTCACGTAATCACTGTTAATATTGGTGAGGATGTTAACTTGAAAGTCATGTCATTTTCTCAACAAGGATCTCGGGCAATTTGTATACTCTCTGCTAATGGAATGGTTTCAAATGTTACACTTCGGCAGTCAACATCTTCTGGGGGTACTCTAACATATGAGGGTCGATTTGAGATACTTTCATTGTCTGGATCGTATATGCCTTCTGAGATTGGTGGAACAAAGAGCCGATCTGGAGGGATGAGTGTCTCTTTGGCTGGCCCAGATGGCCGAGTGATGGGTGGAGGACTTGCCGGCATGCTGATCGCAGCTGGTCCAGTGCAGGTGGTGGTGGGCAGTTTCTTACCACCAGGTCACCAAGAGGAAAATAAACCAAAGAAGAGTAGGATGGAACCTACATCAAATGCAATTTCACCTCCTGCCATGAAGCCCATAGTCACATCCACTCTGATAGGAGATAAAGCAGCTTCTTTAGACTCAACTCCAGCTTTTCGAACTCCACCAGTCAACGAAAAATCACCTTTTCCAGAAGAATCAAGAGGTGTCAACCATTCAAACCATGAGGTTTCTTGTTGA 960 48.33 MEEKEGVDFGFAVKVSQAPESFGMMDSRPENTSTESEPTPAAAEVALTPAVATNGKKKRGRPRKYGPDGTVAPTLSPMPISSSIPLTGEFPGWKRGRGRSVESIKKSRKFDYEIPGNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMVSNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPVQVVVGSFLPPGHQEENKPKKSRMEPTSNAISPPAMKPIVTSTLIGDKAASLDSTPAFRTPPVNEKSPFPEESRGVNHSNHEVSC 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18078212 18083200 - Lag0038464.1 Lac2g1826 599090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g1826 319 ProSiteProfiles PPC domain profile profile. 124 263 IPR005175 -
Lac2g1826 319 CDD DUF296 128 242 IPR005175 -
Lac2g1826 319 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 242 IPR005175 -
Lac2g1826 319 Gene3D - 129 259 - -
Lac2g1826 319 MobiDBLite consensus disorder prediction 242 272 - -
Lac2g1826 319 MobiDBLite consensus disorder prediction 19 80 - -
Lac2g1826 319 MobiDBLite consensus disorder prediction 285 319 - -
Lac2g1826 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 277 IPR039605 GO:0003680(InterPro)
Lac2g1826 319 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 254 - -
Lac2g1826 319 FunFam AT-hook motif nuclear-localized protein 1-like 129 260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1826 Lac-Chr2:18078212 Lac7g0322 Lac-Chr7:2496090 1.90E-74 dispersed
Lac2g1826 Lac-Chr2:18078212 Lac5g2849 Lac-Chr5:46810279 1.30E-83 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g1826 - - - 0.0