Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g2138 ATGGTTTCTTCTGTTTTTCAATTATTATGTGCTTTGCTTTTCAAGTATTCATTCAATGTGCAAGATATCCTAGACAAAAAGAAGAAAGATGAGTTGCTTTCAATGTTGCATGTCAGAGGAGAGGCTCTGTCCCTTTGCTGCCCCCACATTGATCCCTTGTATTCTGTGCTTTTTGGCATTGATTGTAAGCATAGTCGATGGTACACAACTAAGGAGATTAAGAAGTTGGAAAAGGAAAACATCTTAGCTCAAATTTTTACATTTCGTGAGCTATGCATTGCGACAAATAACTTCGACCGCGAAAATCTATTGGGAGAAGGTGGTTTCGGAAGAGTTTACAAAGGCCTCATTGGAAGAACAAAACAAGTAGCAGCTGTGAAGCAACTTGATCGAAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTTATGTTGAGCCTTCTTCATCATCCCAATCTTGTCAATTTGGTTGGGTATTGTGCTAATGCAAGTCAGAGGATATTGGTTTATGAGTACATGGCTAAAGGTTCCTTGGAGGATCATCTTCTTGATATAACTTCAAATAACCCACCTCTAGATTGGAAGACAAGGATGAAAATCGTCGAAGGAGCGGCAAGAGGACTCGAATACTTACACGAAACCGTAAATCCTCCGGTGATATTTCGCGACTTCAAAGCTTCAAACATATTGTTGGATGAGGAATTTAATCCAAAGCTCTCAGATTTTGGTCTTGCAAAGTTAGGCCCCACGGGGGATAAGTCTCATGTTTCCACTAGAGTCATGGGAACCTATGGTTATTGTGCTCCTGAATATGCACTTACAGGCCAATTGACGACCAAATCCGATGTCTACAGTTTTGGCGTCGTATTTTTGGAGATAATCACAGGAAGAAGAGTTATAGACAACACAAAACCAAAGGGAGAAAAAAATTTAATTACATGGGCACAACCACTTATTAGGGACAAAAAGAAATTCACACAAATGGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAGGCTTTGTATCAAGCTTTGGCAGTGGTAGCCATGTGTTTACAAGAGGAAGCAAATACTCGGCCATTAATAAGCGATGTGGTTACTGCTCTTCAATATTTAGCTGTAAACGACGATGTCGATGTAGACATAGATAAAAAATCAGATTCGAAATCGGAGTCGGAGTCGGAGTCGGAGTCGGGGTCGGGATTAAGTTCATATTCAGGTTCAACTACTCATACAAGTAGTAATAATGAAGATAGGAATGTTGATATTGTAGGTGATGGGAGGTGA 1296 39.97 MVSSVFQLLCALLFKYSFNVQDILDKKKKDELLSMLHVRGEALSLCCPHIDPLYSVLFGIDCKHSRWYTTKEIKKLEKENILAQIFTFRELCIATNNFDRENLLGEGGFGRVYKGLIGRTKQVAAVKQLDRNGFQGNREFLVEVFMLSLLHHPNLVNLVGYCANASQRILVYEYMAKGSLEDHLLDITSNNPPLDWKTRMKIVEGAARGLEYLHETVNPPVIFRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNTKPKGEKNLITWAQPLIRDKKKFTQMADPKLEGNYPVKALYQALAVVAMCLQEEANTRPLISDVVTALQYLAVNDDVDVDIDKKSDSKSESESESESGSGLSSYSGSTTHTSSNNEDRNVDIVGDGR 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26456278 26460616 + Lag0038776.1 Lac2g2138 599402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g2138 431 MobiDBLite consensus disorder prediction 385 431 - -
Lac2g2138 431 ProSiteProfiles Protein kinase domain profile. 98 375 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac2g2138 431 PANTHER OS07G0668900 PROTEIN 73 396 - -
Lac2g2138 431 CDD STKc_IRAK 104 373 - -
Lac2g2138 431 SUPERFAMILY Protein kinase-like (PK-like) 82 374 IPR011009 -
Lac2g2138 431 FunFam probable serine/threonine-protein kinase RLCKVII 70 174 - -
Lac2g2138 431 Gene3D Transferase(Phosphotransferase) domain 1 175 398 - -
Lac2g2138 431 FunFam Serine/threonine-protein kinase PBS1 175 392 - -
Lac2g2138 431 Gene3D Phosphorylase Kinase; domain 1 60 174 - -
Lac2g2138 431 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524(InterPro)
Lac2g2138 431 MobiDBLite consensus disorder prediction 398 423 - -
Lac2g2138 431 Pfam Protein kinase domain 100 369 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g2138 Lac-Chr2:26456278 Lac5g1402 Lac-Chr5:28145867 3.80E-158 dispersed
Lac10g1668 Lac-Chr10:18292872 Lac2g2138 Lac-Chr2:26456278 1.10E-57 wgd
Lac2g2138 Lac-Chr2:26456278 Lac2g2300 Lac-Chr2:31343464 6.70E-63 wgd
Lac2g2138 Lac-Chr2:26456278 Lac3g2607 Lac-Chr3:39996838 6.00E-79 wgd
Lac2g2138 Lac-Chr2:26456278 Lac4g0481 Lac-Chr4:11099170 7.10E-07 wgd
Lac2g2138 Lac-Chr2:26456278 Lac8g1144 Lac-Chr8:24508255 1.50E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86036 PF00069 Pkinase 1.40E-45 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g2138 - - - 0.0