Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g2441 | ATGGCTTGCCCACACATTTCAGGTGTTGTAGGCCTCCTCAAGACCCTTTATCCCACATGGAGTCCAGCAGCTATCAAATCTGCCATCATGACTACAGCCAAAACAAGAGACAACACCATGCATTCAATATTGGACTTTACCAAAGTCAAGGCAACCCCATTTGATTATGGTTCAGGACATGTCCATCCAAACAATGCAATGGACCCAGGCCTCATTTACGACACAACAATTGATGATTACTTGAACTTTTTGTGTGCGCGGGGCTACAACTACACCCAACTCAAGAAATTCTCTAACAAACGATTCGTTTGCACCAAATCATTTGCAGTCACAGATCTCAATTATCCATCGATCTTGGTCCCAAAGTTGAACATGAGTGCCCCAATGACGATCAATAGAAGAGTTAAGAATGTGGGAAGCCCAGGCACTTATGTTGCACGAGTGAAGGTGCCTGTAGGAATTGCGGTTACGGTCGAACCGAGTACGTTGCAATTTAACAATGTGGATGAAGAGAAGGCTTTCAAGTTATGTCGCATGGGTACTGTTGAGACGCTACGACTTTGTTTGTGCAAGTCAGTTTCATCACAAAAAGAAAGTGGTCGGTGGAGAGCGATCAGCAGAAGTCGACGATGGTCGGTAGTCGAAGGTCGATGGTGGCAGTCGGTCGGCGGTGTCCGATCGACGGAGGTTGATGGTGGCGATCGTCGGTCAACGGAGGGTGGTCAACAGAGGTCGGCAACAGACGGTAGTCAGAGGTCAACAGTGGCAACCGATAGTCTGAGGTCGACGGTTGCAGGCGGTTGGCGGAGGTCGACGACAACCAATAGTTGGAGGTCGACAATGGCGGTCGATCGGTGGAGGCAAGTCAATGGAGGTTTGCAAACGTTGGCGGCGACCGATAGTCAGAGGTCGATGATGACGGTCGATCGGTGGCGACTAGTAATCAACGATCTGAAAGGATTTGGAATTCCCCAATTCCGTTAA | 984 | 48.98 | MACPHISGVVGLLKTLYPTWSPAAIKSAIMTTAKTRDNTMHSILDFTKVKATPFDYGSGHVHPNNAMDPGLIYDTTIDDYLNFLCARGYNYTQLKKFSNKRFVCTKSFAVTDLNYPSILVPKLNMSAPMTINRRVKNVGSPGTYVARVKVPVGIAVTVEPSTLQFNNVDEEKAFKLCRMGTVETLRLCLCKSVSSQKESGRWRAISRSRRWSVVEGRWWQSVGGVRSTEVDGGDRRSTEGGQQRSATDGSQRSTVATDSLRSTVAGGWRRSTTTNSWRSTMAVDRWRQVNGGLQTLAATDSQRSMMTVDRWRLVINDLKGFGIPQFR | 327 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 35412559 | 35415860 | - | Lag0039079.1 | Lac2g2441 | 599705 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g2441 | 327 | MobiDBLite | consensus disorder prediction | 239 | 273 | - | - | |
| Lac2g2441 | 327 | SUPERFAMILY | Subtilisin-like | 1 | 106 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Lac2g2441 | 327 | Gene3D | Peptidase S8/S53 domain | 1 | 80 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Lac2g2441 | 327 | Pfam | Fibronectin type-III domain | 112 | 176 | IPR041469 | - | |
| Lac2g2441 | 327 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 67 | - | - | |
| Lac2g2441 | 327 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 1 | 214 | IPR045051 | - | |
| Lac2g2441 | 327 | Gene3D | - | 84 | 204 | - | - | |
| Lac2g2441 | 327 | MobiDBLite | consensus disorder prediction | 225 | 273 | - | - | |
| Lac2g2441 | 327 | Pfam | Subtilase family | 1 | 37 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g2441 | Lac-Chr2:35412559 | Lac5g0642 | Lac-Chr5:7928245 | 6.80E-83 | dispersed | |
| Lac2g2441 | Lac-Chr2:35412559 | Lac5g0734 | Lac-Chr5:9543800 | 3.60E-68 | transposed |
Pathway information