Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g2442 ATGGATGTTTTACAATATGCAATAGACAATCCAAGTGTGGTATCAATTTTTGAAAACAAGAAAAGGAAATTGCATACAACACGATCATGGAGTTTTCTTGGGGTGGACAATGATAATGGAATTCCTCCAAGTTCCATTTGGAACGCAGCGAGGTTCGGCGAAGATACAATTATAGGGAACCTGGACACAGGTGTTTGGCCAGAGTCCAAGAGCTTCAACGATGCAGGTTATGGTCCTGTACCTTCGAGGTGGAGGGGAGCTTGTGAAGGTGGCTCCAACTTTCATTGCAACAGGAAGTTGATTGGAGCTCGATATTTCTACCAAGGATTTGCAAGTATACATGGTCCTCTCAACATTAGCTTCAACAATGCACGAGACCAAGAAGGCCATGGATCACACACTTTGTCCACTGCAGGTGGCAACTTTGTCCCTGGAGCCAATGTCCTTGGCAATGGCAATGGGACTGCAAAAGGAGGTTCCCCCAAAGCTCGTGTTGCTGCATACAAGGTATGTTGGCCTGGGGATGATGCCGGCTGTTACGATGCGGATATCCTAGCCGGTTTTGAAGCTGCCATTGGTGATGGTGTCGATGTTCTCTCAGTCTCTCTTGGTACAATGGCTCAAGAGTTTGCTTCTGACCCCATTTCGATAGGGGCATTCCATGCTGTTCAACAAGGAATTGTCGTGGTTTGCTCGGCAGGAAATGATGGCCCAACTCCTGGGACTGTAACAAATGTATCTCCTTGGATTTTCACTGTTGGAGCTAGTTCCATTGATCGAGACTTCGTCAATTATGTGGCCCTCGGAAACAAGAAGCATTTCAAGGGTTCAAGTCTTTCATCTGGAGGATTGTCGGGTGGAAAATTCTACCCTTTGATCAATGCTGTGGAAGCAAGAGCCGCCAATGCCTCTGATAACCTTGCCCAACTTTGTGAAGAGGGATCACTTGATCCCACAAATGCAAAAGGGAAGATTGTAGTTTGCCTTCGAGGAGACAATGCAAGAGTAGACAAGGGTTTCGAGGTTCATCGCGTCGGTGGTGTCGGTATGATTTTGGTCAATGACAAGGAAGATGGATCTGCCGTTGTAGCCGATTTACACTTACTTCCTACTTCTCATGTAAGCTACATCGATGGACTTTCTATCACTCAATATATGAACTCGACCAAAACACCTATGGCTTTCATAACCCATGTAAGGACTGAGTTGGGAATTAAACCATCACCTACCATGGCTGATTTCTCATCAAGAGGCCCCAATTCCATAGAAGAGTCCATCATCAAGGTCCCTAGGTTTCAAAATCGAACAATCAAGTCCCCACTTTTTCGGAAATAG 1335 45.77 MDVLQYAIDNPSVVSIFENKKRKLHTTRSWSFLGVDNDNGIPPSSIWNAARFGEDTIIGNLDTGVWPESKSFNDAGYGPVPSRWRGACEGGSNFHCNRKLIGARYFYQGFASIHGPLNISFNNARDQEGHGSHTLSTAGGNFVPGANVLGNGNGTAKGGSPKARVAAYKVCWPGDDAGCYDADILAGFEAAIGDGVDVLSVSLGTMAQEFASDPISIGAFHAVQQGIVVVCSAGNDGPTPGTVTNVSPWIFTVGASSIDRDFVNYVALGNKKHFKGSSLSSGGLSGGKFYPLINAVEARAANASDNLAQLCEEGSLDPTNAKGKIVVCLRGDNARVDKGFEVHRVGGVGMILVNDKEDGSAVVADLHLLPTSHVSYIDGLSITQYMNSTKTPMAFITHVRTELGIKPSPTMADFSSRGPNSIEESIIKVPRFQNRTIKSPLFRK 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35422186 35426026 - Lag0039080.1 Lac2g2442 599706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g2442 444 SUPERFAMILY Subtilisin-like 24 425 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac2g2442 444 ProSiteProfiles Serine proteases, subtilase domain profile. 29 444 - -
Lac2g2442 444 Gene3D Peptidase S8/S53 domain 55 428 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac2g2442 444 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 12 428 IPR045051 -
Lac2g2442 444 Pfam Subtilase family 53 421 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac2g2442 444 Coils Coil 293 313 - -
Lac2g2442 444 Gene3D - 259 403 - -
Lac2g2442 444 FunFam subtilisin-like protease SBT1.5 259 403 - -
Lac2g2442 444 CDD PA_subtilisin_like 265 396 - -
Lac2g2442 444 CDD Peptidases_S8_3 23 258 IPR034197 -
Lac2g2442 444 Pfam PA domain 300 382 IPR003137 -
Lac2g2442 444 SUPERFAMILY PA domain 318 390 IPR046450 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g2442 Lac-Chr2:35422186 Lac5g0642 Lac-Chr5:7928245 4.70E-212 dispersed
Lac2g2442 Lac-Chr2:35422186 Lac5g0734 Lac-Chr5:9543800 1.00E-158 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g2442 - - - 0.0