Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g2448 ATGGCCGCCCTTCACCAAACCGCCGCCTCTCTCCAGGCCAAGCTCCTTCCAACCGTCCGAATCTCCCGAACCACTCCCGTAAACCTCTCATTCTCCGCCACTTTTCCTTCCCGCAGACTCCGCCTCGGCCACCAGCGCTCTCACGGCGGCGCTAGAATGTCTGCTACCGCCGCCGGAAGCTACGCCTCCGCGCTCGCCGAAGTCGCCGCCTCGAACAACACGCTGGACGCCACAAGCGCCGACGTCGAGAAGATCGAGAGCGTGTTCGCCGATTCGCAGGTGTTCGATTTCTTCGCGAATCCGACGATTAGCATCGAGAAGAAGCTCGAGGTCGTGGACGAGATCGCTTCCTCCTCGTCTCTACAGCCGCATTCGGCGAATTTCTTGAAGATCCTGGTGGACTCGAAGAGGATCGACATCGTGAAGGAGATCGTGACGGAGTTCGAATTGGTGTACAACAAATTGACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCAATTGGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGCGGAGCGAAGAATGTGAGGATCAAGACGCAGATCGATCCAAGTCTGGTGGCTGGATTCACTGTCAGGTTTGGAAATTCTGGATCGAAACTCATTGATTTGAGCGTTAAGAAACAGCTTGAAGAAATAGCTGCTCAGCTTGATCTCGGCAACATTCAACTGGCTGTATAA 723 55.19 MAALHQTAASLQAKLLPTVRISRTTPVNLSFSATFPSRRLRLGHQRSHGGARMSATAAGSYASALAEVAASNNTLDATSADVEKIESVFADSQVFDFFANPTISIEKKLEVVDEIASSSSLQPHSANFLKILVDSKRIDIVKEIVTEFELVYNKLTNTELAVVSSVVQLEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35650202 35650924 - Lag0039086.1 Lac2g2448 599712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g2448 240 PRINTS ATP synthase delta subunit signature 137 151 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Lac2g2448 240 PRINTS ATP synthase delta subunit signature 206 224 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Lac2g2448 240 PRINTS ATP synthase delta subunit signature 188 203 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Lac2g2448 240 PRINTS ATP synthase delta subunit signature 57 76 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Lac2g2448 240 PRINTS ATP synthase delta subunit signature 126 137 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Lac2g2448 240 NCBIfam ATP synthase F1 subunit delta 58 231 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Lac2g2448 240 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 54 157 IPR026015 -
Lac2g2448 240 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 190 209 IPR020781 GO:0015986(InterPro)|GO:0016020(InterPro)|GO:0046933(InterPro)
Lac2g2448 240 Hamap ATP synthase subunit delta [atpD]. 53 233 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Lac2g2448 240 Pfam ATP synthase delta (OSCP) subunit 58 231 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Lac2g2448 240 PANTHER ATP SYNTHASE DELTA CHAIN 30 231 IPR000711 GO:0009535(PANTHER)|GO:0009772(PANTHER)|GO:0009773(PANTHER)|GO:0015986(InterPro)|GO:0015986(PANTHER)|GO:0045261(PANTHER)|GO:0046933(PANTHER)|GO:0046933(InterPro)
Lac2g2448 240 Gene3D - 57 149 IPR026015 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0519 Lac-Chr11:5397621 Lac2g2448 Lac-Chr2:35650202 7.00E-13 dispersed
Lac2g2448 Lac-Chr2:35650202 Lac7g0112 Lac-Chr7:918297 1.50E-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g2448 K02113 - csv:101211740 402.134