Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g2682 ATGTCCACATCCACCAGAACCAACCATATAGCTTCTTCATTCTCCACATCTAATCTTCACCAATTTACACATTTTGCATTCTTTCCTCCTCCACTCTCACCTTCTGCTTCTCCGGCCATGGCTTCCTTGGCAGCCTCCACCGCAGCCGCCTCGCTCGGCGTCTCCGAAATGCTCAGAAATCCCCTCAGCTTCTCCGGCGCCTCCGCCCGGTCCGCTCCCTCTGCTTCTAGCCCGGTCACCTTCAAGACCGTTGCGCTCTTCGGGAAGAAGCCGGCCGCTGCTTCCAAGCCGAAGCCCTCCGCCGTCTCTCCGGCCAACGACGAGCTCGCCAAGTGGTATGGTCCCGACAGAAGGATTTTCTTGCCTGATGGGCTGTTGGACCGATCCGAGATCCCGGAGTACTTGAACGGCGAGGTCCCCGGAGACTACGGTTACGACCCGTTTGGACTGAGCAAGAAACCAGAAGACTTCAGCAAATACCAAGCATTTGAGTTGATTCATGCACGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTTGGTGCTAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATTGCCGCCGTCATTGCTGAGGTTGTTCTTGTTGGTGGTGCTGAATATTACAGAATCATCAACGGCTTGAACTTTGAGGACAAGCTTCACCCGGGAGGGCCGTTCGACCCGTTGGGGCTGGCGGACGACCCGGACCAGGCGGCGATCTTGAAGGTGAAGGAGATAAAGAATGGAAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCTTACGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCCAAGCATTTGAGCGATCCTTTTGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCTGAAAGAGTTCCAACTCTTTAA 993 53.07 MSTSTRTNHIASSFSTSNLHQFTHFAFFPPPLSPSASPAMASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAASKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 41283517 41286021 + Lag0039320.1 Lac2g2682 599946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g2682 330 FunFam Chlorophyll a-b binding protein, chloroplastic 119 330 - -
Lac2g2682 330 SUPERFAMILY Chlorophyll a-b binding protein 112 320 - -
Lac2g2682 330 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 58 325 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Lac2g2682 330 Pfam Chlorophyll A-B binding protein 132 293 IPR022796 -
Lac2g2682 330 Gene3D Chlorophyll a/b binding protein domain 119 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g2682 Lac-Chr2:41283517 Lac9g2258 Lac-Chr9:41942147 6.50E-57 dispersed
Lac2g2682 Lac-Chr2:41283517 Lac5g1661 Lac-Chr5:33724674 3.70E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g2682 K08916 - csv:101218137 541.962