Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac2g2843 | ATGGCTGATGTGGTTAATATTTCAATTTGGACAGTCGTGGTTTGTTTGGTTGTATTGGGATGGAAAGTTCTTAACTGGATTTGGCTGAGGCCGAAGAAATTAGAGAAGCTTCTCAGACAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTATGGCGACTTGAAGGACAGAGCCACCATGAGGGAGCGGGCAATCTCGAAGCCGATGAACTTCTCCAATGATATTGCTCCACGTGTTAATCCTTCTATTCATCATACCATCCAGAATTATGGTAAAAATTCATTTATGTGGATTGGCCCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAACTGTGTTTACATTAATCAATGATTTCCAAAAGCCAAGCATGAATCCTCTGGTCAAGTTGCTTGCACATGGACTCTTAAACCATGAAGGAGAAAAATGGGTCAAACATAGAAAGATAATCAATCCTGCATTTCATTTAGAAAAGCTCAAGGACATGGTACCAGCATTCTATCACAGTGCTAATGAGATGGTTAGCAAATGGGAAAGCATGGTTTCTGAAGAGGGATCATGTGAGTTGGATGTAATGCCTTATCTACAAAATATGGCTGCTGATGTCATTTCTCGAACAGCATTTGGAAGTAGCTACGAAGAAGGAAAAAAGATCTTCAAGCTTCAAATTGAATTAGCTGATTTAGTGATTCAATCTACCATGGGAATTTATATTCCAGGATGGAGATTTCTACCCACAAAGTCAAACAACAAAATTAAAGTGATGAGTAATGAGATAAAAACTTTGATCTTGGGTATCATAAATGAAAGACAAGAGTCTATGAAGGCAGGTGAAACTATACAGGGCGATCTATTAGGCATTCTCATGGAATCAAATTTCAAAGAAATTCGAGAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGATGAGTGCAAGCTTTTCTACATCGCTGGCCAAGAAACTACAGCTACATTACTAATTTGGACGATGGTTTTATTGAGTTCATACTCAGAATGGCAAGAGCGAGCAAGAAAAGAGGTCTTCGAAGTCTTTGGTAACAAGAAACCAGATTATGATGGTTTAAGTCGCCTAAAAGTTGTAACTATGATCCTGAATGAGGTTCTCAGGAGTGATGATAGGCTTACCTATGATTTTATCCAGCGTGATCATGAGCTATGGGGTGAAGATGTAGATGAATTCAAACCAGAAAGATTTTCTGAAGGAGTTTCTAAAGCAACGAAAAATCCAACCGCTTTTGCCCCATTTGGTTGGGGTCCTCGTATATGCATAGGACTAAACTTTGCTATGATTGAAGCAAAAATGGCATTAGCAATAATCCTACAACGCTTCTCATTTGAGCTTTCTTCATCGTATACTCACGCTCCTATCGTAGCTATAACAACACAACCTCAACATGGAGCTCATATCGTCCTACACAAATTGTAG | 1473 | 39.1 | MADVVNISIWTVVVCLVVLGWKVLNWIWLRPKKLEKLLRQQGFAGNSYRILYGDLKDRATMRERAISKPMNFSNDIAPRVNPSIHHTIQNYGKNSFMWIGPIPRVHIMDPEQLKTVFTLINDFQKPSMNPLVKLLAHGLLNHEGEKWVKHRKIINPAFHLEKLKDMVPAFYHSANEMVSKWESMVSEEGSCELDVMPYLQNMAADVISRTAFGSSYEEGKKIFKLQIELADLVIQSTMGIYIPGWRFLPTKSNNKIKVMSNEIKTLILGIINERQESMKAGETIQGDLLGILMESNFKEIREHGNNKDIGMSIEDVIDECKLFYIAGQETTATLLIWTMVLLSSYSEWQERARKEVFEVFGNKKPDYDGLSRLKVVTMILNEVLRSDDRLTYDFIQRDHELWGEDVDEFKPERFSEGVSKATKNPTAFAPFGWGPRICIGLNFAMIEAKMALAIILQRFSFELSSSYTHAPIVAITTQPQHGAHIVLHKL | 490 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 44657521 | 44660414 | + | Lag0039481.1 | Lac2g2843 | 600107 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac2g2843 | 490 | Pfam | Cytochrome P450 | 395 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | Pfam | Cytochrome P450 | 86 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | Gene3D | Cytochrome P450 | 58 | 388 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | Gene3D | Cytochrome P450 | 390 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 13 | 482 | IPR050665 | GO:0004497(PANTHER) | |
| Lac2g2843 | 490 | PRINTS | E-class P450 group I signature | 335 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PRINTS | E-class P450 group I signature | 315 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PRINTS | E-class P450 group I signature | 88 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PRINTS | E-class P450 group I signature | 202 | 220 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PRINTS | P450 superfamily signature | 438 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PRINTS | P450 superfamily signature | 326 | 343 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac2g2843 | 490 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac2g2843 | 490 | SUPERFAMILY | Cytochrome P450 | 80 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g1116 | Lac-Chr2:8877095 | Lac2g2843 | Lac-Chr2:44657521 | 1.70E-253 | dispersed | |
| Lac2g1117 | Lac-Chr2:8885296 | Lac2g2843 | Lac-Chr2:44657521 | 5.00E-221 | dispersed | |
| Lac2g1118 | Lac-Chr2:8896310 | Lac2g2843 | Lac-Chr2:44657521 | 2.80E-207 | dispersed | |
| Lac2g2843 | Lac-Chr2:44657521 | Lac3g2014 | Lac-Chr3:23764890 | 4.10E-132 | dispersed | |
| Lac2g2843 | Lac-Chr2:44657521 | Lac3g0839 | Lac-Chr3:6698421 | 8.30E-101 | transposed |
Pathway information