Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac2g2971 ATGGAGGTTTTGAAGTTCTTCTTCATTCTTTTCTCGACGGCGTCGTTTCTCTCTCTATCGGAATCGGCTCCTCTCACCTCGAATTACTACCAGAAATCCTGCCCGAGATTCACCCAGATTATCCAAGAAACCATCACCAACAAGCAGATCACAAGCCCTTCCACCGTCGCCGGAACTCTCCGCCTCTTCCTCCACGACTGCCTCCCCAACGGCTGCGACGGCTCTGTCCTAATCTCCTCCACTCCCTTCAACAAAGCCGAGCGCGACGCCGACATCAACCTCTCTCTCCCCGGCGACGCATTCGATGTCATCGTTCGGGCCAAGACCGCTCTCGAGCTCGCATGTCCGAACACAGTCTCCTGTGCTGACATTCTCGCCGTCGCCACTCGCGACCTGGTCACCATGGTCGGCGGACCTTATTACAATGTTCTCCTCGGTCGCCGTGACGGCCGTGTGTCGAAAGCTTCGACGATTCCTGGTGCTCTCCCGATGGCTACCTCGCCGATGCCTCTGTTTTCCGGCGCCGGAACGGAGGGAGGAGGTCTCTCCCTCCCTCCCCGTTACAGATCTGTAACGGGGAGGGAGGGAGGGGCCTCCTCCCTCCGTTCCGGCGCCGGAAAACGGAGGAGGGAGCTCCATCCTCCTTTCTCTTTCATTTAA 660 58.18 MEVLKFFFILFSTASFLSLSESAPLTSNYYQKSCPRFTQIIQETITNKQITSPSTVAGTLRLFLHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVIVRAKTALELACPNTVSCADILAVATRDLVTMVGGPYYNVLLGRRDGRVSKASTIPGALPMATSPMPLFSGAGTEGGGLSLPPRYRSVTGREGGASSLRSGAGKRRRELHPPFSFI 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 47185608 47186267 - Lag0039609.1 Lac2g2971 600235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac2g2971 219 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 Gene3D - 25 166 - -
Lac2g2971 219 MobiDBLite consensus disorder prediction 204 219 - -
Lac2g2971 219 MobiDBLite consensus disorder prediction 175 219 - -
Lac2g2971 219 ProSiteProfiles Plant heme peroxidase family profile. 24 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 Pfam Peroxidase 43 166 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 SUPERFAMILY Heme-dependent peroxidases 25 169 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 PANTHER - 9 168 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac2g2971 219 FunFam Peroxidase 28 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1308 Lac-Chr2:10884741 Lac2g2971 Lac-Chr2:47185608 2.20E-07 dispersed
Lac2g2971 Lac-Chr2:47185608 Lac8g2616 Lac-Chr8:43756430 2.90E-61 dispersed
Lac2g3138 Lac-Chr2:49696904 Lac2g2971 Lac-Chr2:47185608 6.70E-06 dispersed
Lac2g2971 Lac-Chr2:47185608 Lac8g0409 Lac-Chr8:5201816 3.50E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac2g2971 K00430 - csv:101219829 311.227