Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0015 ATGATGATGCAACACCATAGAGATAGGGTTAAGTTGGTACTTAAAATACATACAAAACAACCACCTCCCTGCACTGCACAGGCACAGCGCAGCGCAGCAGACAGCACTGCCCATATTTTATATTTATATCGGCTGCGCCAGAGCCACCTAGTTAGTTACGCAAACGCTGTTGAAGAAGTTGCTGAGTTTCTGAGGATGTCCCTTCCAACCCACCCCTTGCTCTTGTTTTCTTTCTCTGTGGCCTCTTGTCTCCTGAGTCCTGTTGAGTTGAGATTTGAGACCCCAGGCCCAAGCAAAGGAAGGTCGCAAAAGGGGCGACAGGTTGCATTGTTTGTAGTCGTGTACCCTACACATACACATATACACAAACACATACACTACGCTAGCACTAGCGTTAGCACTAAATATCCAATTCCGCAAATGGATCCAGAAGCCCTCTCCGCCACTTTGTTCAAATGGGATCCTCGAGGAATCGTGGGGGGAGGCGGCGGTGCACCTCTCCCAGCACCACTACCGCCCTACTCGCTGCGGCCCAGGGAGTTGGGACTGGGAGGCCTGGAGGACTTGTTCCAGGCTTACGGTATCAGGTACTACACTGCCGCTAAAATTGCGGAACTCGGTTTCACCGTCAGCACCCTCCTGGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTCCGCTGGGAGCTTCTGGTCGGTGAGAGGTACGGAATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTCTAGATGACGAGATCGACTCCTCAAGGCGCCGTCACGTCTTGTCCAACGACACCACTACCAACGTAGTCCTCGATGCCCTTTCTCAGGAAGGGCTATCGGAAGAGCCGGTGCAGCAGGAGAAGGAGGTGGTGGGGAGCGGAGGAGGAGGAACGTGGGAGGCAGTTGCAGCGGCTGAAATCAGGAAGAAGCAGCGGAGGAGAAATGGATCAAAGAAGAAGCAGGTGATGGTGATGGAGGAGGATCACGATGAAAACGAGGGAGCTGGGGACGAGGAGGATATTATGGAAGTCAGCGAGAGACAGCGAGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGGGGAAAAAAGAACGGCCTGGACTATCTCTTCCACCTCTATGAGCAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCCAAGGAACGTGGAGAAAAATGCCCTACGAAGGTGACGAACCAGGTGTTTAGATATGCGAAGAAAGCGGGAGCAAGTTACATAAACAAGCCAAAAATGAGACACTACGTGCACTGCTATGCCTTGCATTGTCTGGACGAGGAAGCGTCAAACGCATTGAGGAGGGTTTTCAAAGAGAGGGGTGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCGCTGGTAGCCATAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATTTGGTATGTGCCTACCAAACTCCGACAACTCTGCCACACCGAGCGCAACAGTGCCACAGCCTCCACCGCGGCTGCTGCCGATCACTTAACTTTTTAA 1578 52.41 MMMQHHRDRVKLVLKIHTKQPPPCTAQAQRSAADSTAHILYLYRLRQSHLVSYANAVEEVAEFLRMSLPTHPLLLFSFSVASCLLSPVELRFETPGPSKGRSQKGRQVALFVVVYPTHTHIHKHIHYASTSVSTKYPIPQMDPEALSATLFKWDPRGIVGGGGGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAVRAERRRLDDEIDSSRRRHVLSNDTTTNVVLDALSQEGLSEEPVQQEKEVVGSGGGGTWEAVAAAEIRKKQRRRNGSKKKQVMVMEEDHDENEGAGDEEDIMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHTERNSATASTAAAADHLTF 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 184959 187571 + Lag0033543.1 Lac3g0015 600437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0015 525 MobiDBLite consensus disorder prediction 317 345 - -
Lac3g0015 525 Coils Coil 245 265 - -
Lac3g0015 525 Gene3D Protein LEAFY 351 519 IPR038276 -
Lac3g0015 525 Pfam Floricaula / Leafy protein SAM domain 183 258 IPR035079 -
Lac3g0015 525 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 351 513 IPR035209 GO:0003677(InterPro)
Lac3g0015 525 PANTHER PROTEIN LEAFY 141 519 IPR002910 GO:0003677(InterPro)|GO:0006355(InterPro)
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23538 PF17538 C_LFY_FLO 4.40E-108 CL0123 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0015 - - - 0.0