Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0027 GTCACTGTAAATTCTGGTGGAGTTGTTTTCTTTGCACTCTTCAATCAGCTTGGTTATGACGATAATTTTCCAAAGGAAGCAGCTGCTGTTATAAAGATATCATCTTCAAGAATGGCCACGCAATCTGAACGCCTGGGTTATGAATTTGCTAAGTGGCTTGGGGTTCAAACTCCACAGGCTAGGGTTATTCATAATTCCAGCATGGAATGGCTCCAGATAAAAGAAGCTGCAGAGAAAGCACGAGATGTTGCCTGTTTGGAGGGTGATGAGGTTGGTGAAATGACATGTTCTGAACTATTGGAAGCACTTGAATTTAGCAGATGCCTTTTTCTGATGAGCTATGTACATGGGTCTCCTTTGTTAGAAAGCTCAAATGCATTTGAATCACGGGAAATAGCTGAAAAATTAGCTACTGCCATTGGAAGGATCTTGTTATTAGACCTTGTCATCAGAAATGAAGATAGGCTCCCATGTCGTCTTCTTCGTTGGCGTGGAAATTCCGCAAATCTGCTCATAGCTGATAGAATGACGTGTGTAAATATGAATACATTTGAGGAAGCTTTTGATTCAGCTATTAAGCGATATAGACCAAAAGTTGTTACAACACTTCAAAAAGAAAGAAGGGCAACTTCAGTGGACAATAGATCAAGTTCTAATTCAGGGTTGGTATTAGATGCCTCAGAACTTTGTGATATCGTTGAATCCCCTAAATCTAGTAACCTAAGTGTAAAAAGTCAAATATCAGATGAAACAACGCCTTGTGATTTTAACATTGTGGCTATTGACTCTGGTGTTCCTCGTCGACCTCCAGCTGGAAAACGTTCTAATGACCAGTCAATTTACCCAAAGTTAGTTGAGTTGTTACTTAATAGTTCTGAGTTCTCCTCTAATCTATTACATGACATTACAGGAGGGAAATTAGGGTTCCCTTCATTAGCTGATGCCAACTCAACTACTAATATGCAACTTACGGATATGAGTTCTATTGTCCATGAATTTCGGTATGGGTTTCGTGCTGCTCTTAGGGACTTGCAAGGATTTCACATATTTTTGCTTACACTCCACCAAAAGTTAGATAACTCATTACGAGCATTCATGAATATCATAAATAAGTTCCCCTTGGGGGAATCTGATAAAGAGGATTCAGGGGTTCCTGAGTCCCATTTGCAGGGATCTACCACTATTCATTGTTTATCCCCACGTGGTAAGGAACGAACCTCTAGTGACAGTAATATGGATGTTACAGATTCTGCTCCAAGATCATCATCAGGAAATAAAGAAAGCTCAGACTTATCTTCTCCCTTGTCACGAGATAACTCACAAGGAAAGGCATACAAGGGAAGTGCAGAGCCCATTCATAGCCTTCGTCTAACTGCAAAACTGCGAGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCAAATAAAGAATTGGATATGTGGAATGAAGTGCTAAAGAATGAAGCTGTTAAACTCTGCCAGGAGAACAAATTTAATACTGGGTTTTTTGAAGGCAGCGACAGTCATGGAGTTGTTGATGCTTATGAACTGAAGGTCAGACTTGAGCACATTCTTGAAAGGATTGCACTGATATCCGAGGCTGCAAATACAGAAAGGCCTTCTTCAGTTACAGCTGCCTTATTTATAGGCGGTGCCTTGGCTGCAAGATCTGTTTACACTCTTCAGCATCTAGGAATCACTCATATTTTATGTCTCTGCTCAAATGAAATCGGCCAGTCAGATTCTCAGTTTCCTGATCTATTTGAATACAAAAATTTTTCAATAAGCGATAATGAAGACTCAAACATCAGCGGTATCTTTGAAGAAGCTTCTGATTTTATTGTTGACGTTGAAAAAAAGGGTGGAAAGGTCCTGGTTCATTGCTTTGAAGGGAAAAGCAGAAGTGCCACATTAGTTCTTGCTTACTTGATGCTTAGAAAGAAATACACATTGTTAAAGGCATGGAATGCTTTGAAACGAGTTCACCGTCGAGCTCAGCCTAATGATGGGTTTGCAAAAACATTATTAGAATTAGATCGAAGAATACATGGAAAAGTTTCCATGGAGTGGCAATCACGAAAACCAACTATGAAAGTTTGCCCAATTTGTGGGAAAAATGCTGGACTGAGCAGTAGCTCACTGAAGCTTCATCTGCAAAAATCACACAAGAAGCTATCATCTGGGAGCGTGGACAGTGCAATGACCATGGAAATACAGAAAGCATTAACAGCTCTAAAAATCAGTCGTGGCGGAAGCGTGAGCCCCACCCAGAGGCAGTCTCTTCTGATCCTGGATGAATAG 2301 40.42 VTVNSGGVVFFALFNQLGYDDNFPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNSSMEWLQIKEAAEKARDVACLEGDEVGEMTCSELLEALEFSRCLFLMSYVHGSPLLESSNAFESREIAEKLATAIGRILLLDLVIRNEDRLPCRLLRWRGNSANLLIADRMTCVNMNTFEEAFDSAIKRYRPKVVTTLQKERRATSVDNRSSSNSGLVLDASELCDIVESPKSSNLSVKSQISDETTPCDFNIVAIDSGVPRRPPAGKRSNDQSIYPKLVELLLNSSEFSSNLLHDITGGKLGFPSLADANSTTNMQLTDMSSIVHEFRYGFRAALRDLQGFHIFLLTLHQKLDNSLRAFMNIINKFPLGESDKEDSGVPESHLQGSTTIHCLSPRGKERTSSDSNMDVTDSAPRSSSGNKESSDLSSPLSRDNSQGKAYKGSAEPIHSLRLTAKLRDFHKFAKVDAESNKELDMWNEVLKNEAVKLCQENKFNTGFFEGSDSHGVVDAYELKVRLEHILERIALISEAANTERPSSVTAALFIGGALAARSVYTLQHLGITHILCLCSNEIGQSDSQFPDLFEYKNFSISDNEDSNISGIFEEASDFIVDVEKKGGKVLVHCFEGKSRSATLVLAYLMLRKKYTLLKAWNALKRVHRRAQPNDGFAKTLLELDRRIHGKVSMEWQSRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQSLLILDE 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 262608 279600 - Lag0033555.1 Lac3g0027 600449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0027 766 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 765 IPR035010 GO:0004721(InterPro)|GO:0009737(InterPro)|GO:0043622(InterPro)
Lac3g0027 766 MobiDBLite consensus disorder prediction 411 443 - -
Lac3g0027 766 ProSitePatterns Tyrosine specific protein phosphatases active site. 626 636 IPR016130 GO:0016311(InterPro)
Lac3g0027 766 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 605 660 IPR000387 GO:0016311(InterPro)
Lac3g0027 766 MobiDBLite consensus disorder prediction 386 401 - -
Lac3g0027 766 MobiDBLite consensus disorder prediction 376 449 - -
Lac3g0027 766 CDD DSP 540 677 - -
Lac3g0027 766 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 539 683 IPR029021 -
Lac3g0027 766 FunFam Dual specificity protein phosphatase PHS1 511 685 - -
Lac3g0027 766 SUPERFAMILY Protein kinase-like (PK-like) 1 278 IPR011009 -
Lac3g0027 766 ProSiteProfiles Dual specificity protein phosphatase domain profile. 539 684 IPR020422 GO:0006470(InterPro)
Lac3g0027 766 SMART dsp_5 539 681 IPR020422 GO:0006470(InterPro)
Lac3g0027 766 Gene3D - 119 220 IPR036940 -
Lac3g0027 766 Gene3D Protein tyrosine phosphatase superfamily 516 685 IPR029021 -
Lac3g0027 766 Pfam Dual specificity phosphatase, catalytic domain 548 680 IPR000340 GO:0016311(InterPro)
Lac3g0027 766 Pfam Actin-fragmin kinase, catalytic 5 208 IPR015275 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0027 K14165 - csv:101220184 1375.92