Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0089 ATGCAACTCAACTTCCCCATCTCCTTCTTCTTCTTCTTCCTTCTCTCTCTCTCTCTATGGGCTTTCTTTTTCCTCTATCTCTGTATCTTTAAATTCTACTGCTTTTCTGCGAAGCGCTTTTCCCCTCCTTCCTACCCTCTCATCGGCTGCCTCTTTTCTTTCTACAAAAACCGCCGCCGCCTTCTCACCTGGTACACCGACCTGCTTTCCGACTCCCCGACGCGGACCATCGTCGTGCACCGGCTCGGTTCGAGGCGGACCGTCGTCACGGCCAACCCGGCCAATGTCGAGTACATGCTCAAGACTAATTTTGTGAATTACCCCAAGGGGAAGCCGTTCACTGATATACTCGGCGATCTCCTCGGCTGTGGCATTTTCAACGTCGACGGCGAGTTGTGGTCCACGCAACGCAAGCTGGCGAGTCACGAATTTTCTGCTAAGTCTTTGAGGGAATTCGTCGTCAAGACGCTTGAAGATGAAGTCCATCTCCGTTTGCTTCCCTTGCTTCACAACGCCGTCCGGACTAACGCCGTCTTGGATTTGCAAGACGTTTTGGGAAGGCTCGCTTTTGACACCGTCTGTAAGGTGACGCTGGGAACGGACGAGCAATGTTTGGACATGTCGCGGCCAGTTCCAGCAATAGTAAATGCATTCGACAGGGCCACAGGGATCAGCGCCAAGCGGGCAATAGCGCCGCTGTTTCTCGCGTGGAAAGCCAAGCGCCTGTTCAACGTCGGCTCCGAAAAGCAGCTCAAAGAAGCAGTGGAAATGGTCCACGCATGGGTATCCAACATCATTCGCAACAAAAACCTTGATAACAGCGATACTGATTTGTTGTCTCGCCTCTTGTCGGCCGGCCACGGCGAAGAGGTCGTCCGAGACATGGTTGTCAGCTTCATAATGGCCGGCCGCGACACCACCTCCGCCGCCATGACGTGGCTCTTCTGGTTGCTCACGAAACACCCCAAGGCCGAAGAGGCCCTGATCAACGAAGTCACTTCCTTGTCCGAAACGGCGTCGTCGGGCTACGCCTACGATGACTTGAAGGACATGAAGTATTTGAAGGCGTGTTTGTGCGAGTCCATGCGGCTTTACCCGCCGGTGGCTTGGGATTCGAAGCACGCGGCGGCGCCGGACGTTCTGCCTGACGGAACTCCGGTGAGGAAAGGCGATAGAGTCACGTATTTCCCGTACGGAATGGGCCGGATGGAGGAGCTCTGGGGAAGGACAGGCTCGAGTTCAAACCGGACCGGTGGCTCCAGAACGGGGAGTTGA 1275 55.22 MQLNFPISFFFFFLLSLSLWAFFFLYLCIFKFYCFSAKRFSPPSYPLIGCLFSFYKNRRRLLTWYTDLLSDSPTRTIVVHRLGSRRTVVTANPANVEYMLKTNFVNYPKGKPFTDILGDLLGCGIFNVDGELWSTQRKLASHEFSAKSLREFVVKTLEDEVHLRLLPLLHNAVRTNAVLDLQDVLGRLAFDTVCKVTLGTDEQCLDMSRPVPAIVNAFDRATGISAKRAIAPLFLAWKAKRLFNVGSEKQLKEAVEMVHAWVSNIIRNKNLDNSDTDLLSRLLSAGHGEEVVRDMVVSFIMAGRDTTSAAMTWLFWLLTKHPKAEEALINEVTSLSETASSGYAYDDLKDMKYLKACLCESMRLYPPVAWDSKHAAAPDVLPDGTPVRKGDRVTYFPYGMGRMEELWGRTGSSSNRTGGSRTGS 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 593029 594518 + Lag0033617.1 Lac3g0089 600511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0089 424 SUPERFAMILY Cytochrome P450 42 408 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0089 424 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0089 424 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0089 424 Pfam Cytochrome P450 42 407 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0089 424 Gene3D Cytochrome P450 40 412 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0089 424 PANTHER CYTOCHROME P450 25 409 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2876 Lac-Chr10:43299498 Lac3g0089 Lac-Chr3:593029 1.40E-46 dispersed
Lac3g0089 Lac-Chr3:593029 Lac4g2600 Lac-Chr4:45092971 1.70E-70 dispersed
Lac7g1124 Lac-Chr7:10387846 Lac3g0089 Lac-Chr3:593029 8.90E-16 transposed
Lac3g0089 Lac-Chr3:593029 Lac8g0105 Lac-Chr8:1408709 1.00E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0089 K20665 - csv:101202989 669.463