Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0106 ATGTTCAGGGCATTTCTTTGGGAAGGAGGTCTATGCAGCAAGGGCCAACATCTTGTTAGATGGAGTAAGCTACTTCATCCCATTGATCAAGGAGGCCTTGGCCTACACTCCATGGTCGATAAAAACAAAGCTCTTTTGCTGAAGTGGATTTGGAGGTACAATCAAGAAAAGAATGCTTTGTGGAGAAAGCTTATCAAGGTTAAATACAGATCCCCCACAAATGCGAAAAAGGCATCCTTTGCAAAGTCAAAAGGCCCCTGGAAGGAAATTTTGAAACATGGCCTTATTTCCAGCCGCATAGTCCACCAGCTTGGCAATGGAGAGGATACTCTCTTTTGGACTGATCTTTGGATCAACAACACCCCATTGGCCACGAGGTATCCCCTTCTCTACCGTCTCTCCCATTGCAAGACAACTACTGTCAAAGAAGTTTGGAATGAATCAACAATCATTGGGACTTCAAATTGGGACTCTCCGGATATGAACAAGACATATGCGGCAATCTTTTCTCCATTTTGGAATGAGATCATTAAAAGCTTACGTGAGGAAGACTATATTAGCAATAGGGAGATGGACTTGCTCTCTATTCCTAGCAACACAGGAAGTCTCAGATTGGTCCAATGGCCTTTATTTCTTTTAAGTAGTAAGATATTCTTGGCTGTTGATTTGGCTTTGGATTGCAAAGATACGCAGACAGATCTGTGGAACAGAATATGTCGGGATGAGTATATGGCCTATGCAGTTCGAGAATGCTACTACAGTGTTGAAAAAATTTTATATGCCCTTGTCGATGGTGAAGGGAGACTTTGGGTTGAAAGGATTTTTCGGGAGATCACCAACAGTATCTCAGAGGATTCCCTGGTTATAACCTTGAACCTTAAGAAGATTCCAATTGTGTTGCAAAAGTTTACTGCGCTTACAGGGCTTTTGACTCGAAAAGAAACTCCTGAACTTGCTAAAGGTGCTGCAAAAGCTGTATTTGAGCTTTATGAGGTTGTTACGCATGAGCTGCTTTCATCAGATTTGAGGGAGCAGCTTGACACATGGAATATCTTGTTGAGGGCAAGAAATGAAGGTCGCCTTTTTTCTCGGATAGAATGGCCGAAGGATCTTGAAATTAAAGAGCTCGTGAAGCGTTTGCATTTACTTCTTACAGTGAAGGATTCTGCAGCTAACATTCCAAAAAATCTTGAAGCAAGAAGAAGACTACAATTTTTTACAAATTCATTATTTATGGACATGCCTTCAGCAAAACCTGTCAGTGAGATGGTGCCATTCAGTGTCTTTACTCCATATTACAGTGAAACTGTGCTTTATAGTTCCTCTGAAATACGGATGGAAAATGAGGATGGCATATCCATTCTTTTCTATCTTCAAAAGATTTTTCCAGATGAATGGGAAAACTTTTTGGAACGGATTGGTCGAAGTCATGCCACGGGGGAAGCTGAGCTCCAAAAAAGTCCAAGTGATGCCTTGGAGCTTCGATTTTGGGTTTCATATCGAGGGCAGACTCTAGCTCGGACAGTTCGCGGTATGATGTACTACAGGAGAGCTTTAATGCTTCAGAGCTATCTGGAGAAGAGATCATTTGGGGACAATTATTCTCAAATCAACTTTCCCACGAATCAAGGGTTTGAGTTATCTCTAGAATCAAGGGCACAAGCAGACTTGAAGTTTACCTATGTTGTTTCCTGTCAAATATATGGGCAACAAAAGCAGAGAAAAGCTCCAGAGGCTACTGATATTGCTCTTTTGCTTCAGAGTGTTGAGGCTTCTATAGGCTATCGACCACAAAAACACTTTCACCTTTTTGGGACTTTTATGCTTCCAGATCCTACTAATGATGGAGGGGTTGATTCTAGTTGGAGACTTAACAAGCTTTTGGAACATAGACTTTGTGGAATAAGAGCCAGAAGAATCGGGCAGCCAACTTATCCCATCCGATTCTGTAGATAA 1956 41.67 MFRAFLWEGGLCSKGQHLVRWSKLLHPIDQGGLGLHSMVDKNKALLLKWIWRYNQEKNALWRKLIKVKYRSPTNAKKASFAKSKGPWKEILKHGLISSRIVHQLGNGEDTLFWTDLWINNTPLATRYPLLYRLSHCKTTTVKEVWNESTIIGTSNWDSPDMNKTYAAIFSPFWNEIIKSLREEDYISNREMDLLSIPSNTGSLRLVQWPLFLLSSKIFLAVDLALDCKDTQTDLWNRICRDEYMAYAVRECYYSVEKILYALVDGEGRLWVERIFREITNSISEDSLVITLNLKKIPIVLQKFTALTGLLTRKETPELAKGAAKAVFELYEVVTHELLSSDLREQLDTWNILLRARNEGRLFSRIEWPKDLEIKELVKRLHLLLTVKDSAANIPKNLEARRRLQFFTNSLFMDMPSAKPVSEMVPFSVFTPYYSETVLYSSSEIRMENEDGISILFYLQKIFPDEWENFLERIGRSHATGEAELQKSPSDALELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEKRSFGDNYSQINFPTNQGFELSLESRAQADLKFTYVVSCQIYGQQKQRKAPEATDIALLLQSVEASIGYRPQKHFHLFGTFMLPDPTNDGGVDSSWRLNKLLEHRLCGIRARRIGQPTYPIRFCR 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 749620 759788 - Lag0033634.1 Lac3g0106 600528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0106 651 Pfam 1,3-beta-glucan synthase component 393 587 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Lac3g0106 651 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 52 588 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0106 Lac-Chr3:749620 Lac3g1271 Lac-Chr3:10929629 3.20E-108 dispersed
Lac3g2683 Lac-Chr3:41643239 Lac3g0106 Lac-Chr3:749620 5.50E-11 dispersed
Lac3g0106 Lac-Chr3:749620 Lac8g1601 Lac-Chr8:33851909 1.90E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0106 K11000 - csv:101217890 829.706