Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0125 ATGGCTTCGCCTTCCTCCAAACTCCTTCCTTTCCTGGCCTTTCTCTCCATCCTTTTCCAAGTCCATGCCCGGCTGAGCCTTGATCCTTCAGATCTCAGAGCCTTTTCCATCATCAACAATGACTTGGGCATTGGCGCTCAACTCTCCTCCTCCCCATGCGACCTCGCCGGTGTCTTCTGCGAGCGCCGCCTCTCCGACAACGGCACTTATGTTTTGAGGATCACCAGGCTCATTTTCAAGTCCAAAGGACTTGTCGGTTCTCTTTCTCCGGCCATTGGGCGGCTCACGGAGTTGAAAGAGCTTACGTTTTCTAATAATCACCTCGTTGACCAAGTACCAGCTCAAATTGTTGACTGCAGGAAACTGGAAATTCTCGATCTCCAGAACAACCAGTTTTCTGGCAAAGTTCCATCTGGATTGTCCTCGTTGATTCGCCTTCGAGTCATCGATCTTTCGTCCAATAAGTTCTCGGGGAGTTTGGATTTCTTGAAGCATTTCCCCAACTTGGAGAGTCTGTCCATAGCCAACAACTACTTCACGGGGAAGATCCCAGCTTCAATTCGTTCTTTTCGCAATCTTCGAGTCTTCAACTTCTCCGGAAATCGCCTTCTCGAAAGCTCGGCCCCCATCGTGAAAGGCGTCGAGCTCTACTCGGCAAACGAAGTTCCCAAGCGTTATAAGTTATTAGCTGAGAATTCAACAACGAAAGGCAAGCACAGTGCCGCCGCCACAGCGCCAACTTCGAGTGCTCAGGCTCCATCTCCCGCAACATCCCCTACTCATAGGCATAGGAAAAATAAAGTAAAGAAGGTAATTGCTTGGATACTTGGATTCCTCGCAGGAGCAATTGCTGGAAGTTTGTCAGGGTTTATCTTTTCTCTACTGTTTAAAATCGTCATAGCAGTTATAAAAGGTGGAAGCAAGAATTCGGGCCCATCAATCTTTGCTCCCAAGTTAATAAAACGAGAGGATTTGGCTTTTCTAGAGAAAGACGATGCGCTTGCATCACTCGAGCTGATTGGAAAAGGTGGATGTGGAGAAGTTTACAAGGCCGAATTACCAGAAAAAAGCGGGAAAATGTTTGCAATAAAGAAGGTAACTCAACCCCCAAAGGACGCGGCCGAGTTAGCTGAGGAGGATAGCAGGTCTATGAACAAGAAAATGCGTCAGATCAAGTCAGAGATCAGAACTGTGGGTGAAATCCGGCATCGGAATCTTCTTCCTCTTGTGGCCCATGTCCTCCGTCCTGACTGCCACTACCTTGTGTATGAATTAATGAAGAATGGCAGCTTGCAAGATATGTTGAATCAGGTTTCAGCAGGAGTGAAAGAACTAGATTGGCTTACTCGGCATAAGATTGCTATCGGAGTGGCATCTGGGCTGGAGTATCTTCACATGAACCATACCCCACGTATCATTCACAGGGATCTGAAGCCTGCAAATGTTTTGCTTGATGACAACATGGAAGCTCGAATTGCTGATTTTGGGCTGGCAAAAGCAATGCCAGACGCCCAAACTCACATGACAGCTTCAAATGTTGCAGGTACCGTAGGATACATCGCACCAGAGTATCATCAAACCTTGAAGTTCACTGATAAGTGCGATATATACGGCTTTGGGGTTCTGCTAGGTGTCTTGGTGATTGGGAAACTTCCATCTGATGAGTTTTTCCAGGACACGGACGAGATGAGTTTGGTTAAGTGGATGAAGAATGTTATGACTTCGGATAATCCTAGGAGAGCCATTGATCCGAAGCTCCAGGGAAATGGCTGGGAGGAGCAAATGCTCTTGGCCCTCAAAATTGCCTGCTTTTGCACTATGGAGAATCCAAAAGAGAGGCCTAACAGTAAGGATGTCAGATGCATGCTGTCACAGATCAAGCACGATGTACCTGAAATTCCCCCTCACTCTCAGAATGTCTAA 1923 47.17 MASPSSKLLPFLAFLSILFQVHARLSLDPSDLRAFSIINNDLGIGAQLSSSPCDLAGVFCERRLSDNGTYVLRITRLIFKSKGLVGSLSPAIGRLTELKELTFSNNHLVDQVPAQIVDCRKLEILDLQNNQFSGKVPSGLSSLIRLRVIDLSSNKFSGSLDFLKHFPNLESLSIANNYFTGKIPASIRSFRNLRVFNFSGNRLLESSAPIVKGVELYSANEVPKRYKLLAENSTTKGKHSAAATAPTSSAQAPSPATSPTHRHRKNKVKKVIAWILGFLAGAIAGSLSGFIFSLLFKIVIAVIKGGSKNSGPSIFAPKLIKREDLAFLEKDDALASLELIGKGGCGEVYKAELPEKSGKMFAIKKVTQPPKDAAELAEEDSRSMNKKMRQIKSEIRTVGEIRHRNLLPLVAHVLRPDCHYLVYELMKNGSLQDMLNQVSAGVKELDWLTRHKIAIGVASGLEYLHMNHTPRIIHRDLKPANVLLDDNMEARIADFGLAKAMPDAQTHMTASNVAGTVGYIAPEYHQTLKFTDKCDIYGFGVLLGVLVIGKLPSDEFFQDTDEMSLVKWMKNVMTSDNPRRAIDPKLQGNGWEEQMLLALKIACFCTMENPKERPNSKDVRCMLSQIKHDVPEIPPHSQNV 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 885970 887892 - Lag0033653.1 Lac3g0125 600547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0125 640 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515(InterPro)
Lac3g0125 640 SUPERFAMILY L domain-like 46 206 - -
Lac3g0125 640 MobiDBLite consensus disorder prediction 239 264 - -
Lac3g0125 640 MobiDBLite consensus disorder prediction 239 259 - -
Lac3g0125 640 SMART serkin_6 334 627 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0125 640 ProSiteProfiles Protein kinase domain profile. 334 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0125 640 Pfam Leucine Rich Repeat 168 189 IPR001611 GO:0005515(InterPro)
Lac3g0125 640 FunFam Leucine-rich repeat receptor-like protein kinase 426 632 - -
Lac3g0125 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 262 628 IPR051564 GO:0016020(PANTHER)
Lac3g0125 640 Coils Coil 374 394 - -
Lac3g0125 640 Gene3D Ribonuclease Inhibitor 16 226 IPR032675 -
Lac3g0125 640 Gene3D Phosphorylase Kinase; domain 1 326 425 - -
Lac3g0125 640 Gene3D Transferase(Phosphotransferase) domain 1 426 633 - -
Lac3g0125 640 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 69 160 - -
Lac3g0125 640 SUPERFAMILY Protein kinase-like (PK-like) 334 627 IPR011009 -
Lac3g0125 640 Pfam Protein kinase domain 337 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0125 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0125 Lac-Chr3:885970 Lac5g2786 Lac-Chr5:46234150 2.20E-53 dispersed
Lac3g0125 Lac-Chr3:885970 Lac1g2432 Lac-Chr1:45792759 3.80E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86044 PF00069 Pkinase 4.40E-42 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0125 - - - 0.0