Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac3g0134 | ATGGATTCTCATCTTCTTCTCCAGTCGTTATTCCATCCATTTTCCCTCTCTGCTTTCATCGTCTTCCTCATCTTCCTTCTCCAAAAATGGTTGCGTTCTTCACCATCAGAATCCTCACCCCCTTCTCCGCCAAAGCTGCTTCCCATTTTCGGACACCTTTTGAACCTCGCCTCCCTTCCCCATCACACTCTCCAAGCCTACGCCCGCCGCTACGGCCCTCTGTTTCTCCTTCACCTCGGCTCCAACCCCACCATCGTCGTCTCTTCCGCAGAAATGGCTCGCGAAATCATGAAGACCCACGATCTCCTCTTTTCCAACCGACCCAAATCAAGCATGAGCGATAAGCTTCTTTACGAGTCCAAAGATATAGCCGCAGCTCCTTACGGCGAGTACTGGAGGCAGCTGAAAAGCGTGGCCGTGCTCCATCTTTTGAGCAACAAAAGGGTCCAATCCTTTCGCTCTGTCAGAGAAGAAGAGGTCAAATTGATGGTTCAGAAGATCCGACAGGACCCAGTTTCGGTGAATTTAAGCGAAGTGTTCTCTAGATTGACGAACGACGTGGTTTGCAGAGTGGCGTTGGGGAGAAAATATGGGGTGGGAGAAGATGGAAAGAAGTTCTTGTCTCTTCTGAGGCAATTTGGGGAATGTTTGGGGAGTTTCAGCATCAGAGACTTCATTCCATGGCTGGGTTGGATTGATTGTGTCAGTGGATTGGATGCTAAAGCAGAGAGAGTAGCCAAAGAGTTGGATCATTTGATTGAAAGAGTGATTGAAGATCATGTTCATCCAGAGAAGAAAGAGATGAAGGATTTGGTGGATGTGTTGCTTTCTATTCAGAGGGAAGACTCCATCGGCTTTTCCCTTGAGATGAAAAGCGTAAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACGACATACACAGTATTGGAGTGGGCAATGTCCGAACTTTTGAAACACCCAGAAGTGATGAAGAAACTACAAAACGAGGTTAGAGAAAAAGCAGGTGAGAAAGAATACATAAACGAGGACGACTTGGAAAAGATGCTTTACTTGAAAGCAGTAATGAAAGAAACACTGCGCTTACACCCACCAATCCCACTATTGGTTCCAAGAGAATCAACCCAGGACATCAAACTAAAGAGGTACCAAATTAAAGCTAGAACTCGAGTCGTGATCAATGCATGGGCCATCGGAAGAGACCCACAAGTGTGGGAAGATGCAGAGGAGTTCAGACCAGAAAGATTCTTAAACAATCTGATAGATTTCAAGGGCCAGGATTTCATGTTGATCCCATTTGGGGCAGGAAGAAGAGGGTGTCCTGGAATTTTGTTTGCAATGGCGGTCAGTGAGATGGCTATAGCGAATGTGGCGGGTAAGTTTAAGTGGACGTTGCCCGGTGGAGTTGACAATAAGGATTTAGACATGACGGAAGTGTCTGGGTTAAGCATTCATAGAAAGTTTCCACTCATAGCAATGGCGTCTCCTTTTTAG | 1500 | 46.4 | MDSHLLLQSLFHPFSLSAFIVFLIFLLQKWLRSSPSESSPPSPPKLLPIFGHLLNLASLPHHTLQAYARRYGPLFLLHLGSNPTIVVSSAEMAREIMKTHDLLFSNRPKSSMSDKLLYESKDIAAAPYGEYWRQLKSVAVLHLLSNKRVQSFRSVREEEVKLMVQKIRQDPVSVNLSEVFSRLTNDVVCRVALGRKYGVGEDGKKFLSLLRQFGECLGSFSIRDFIPWLGWIDCVSGLDAKAERVAKELDHLIERVIEDHVHPEKKEMKDLVDVLLSIQREDSIGFSLEMKSVKALILDMFAAGTDTTYTVLEWAMSELLKHPEVMKKLQNEVREKAGEKEYINEDDLEKMLYLKAVMKETLRLHPPIPLLVPRESTQDIKLKRYQIKARTRVVINAWAIGRDPQVWEDAEEFRPERFLNNLIDFKGQDFMLIPFGAGRRGCPGILFAMAVSEMAIANVAGKFKWTLPGGVDNKDLDMTEVSGLSIHRKFPLIAMASPF | 499 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 939346 | 941010 | - | Lag0033662.1 | Lac3g0134 | 600556 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac3g0134 | 499 | PANTHER | CYTOCHROME P450 71B11-RELATED | 18 | 496 | IPR050193 | - | |
| Lac3g0134 | 499 | FunFam | Cytochrome P450 83B1 | 26 | 495 | - | - | |
| Lac3g0134 | 499 | Pfam | Cytochrome P450 | 41 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | E-class P450 group I signature | 432 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | E-class P450 group I signature | 442 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | E-class P450 group I signature | 92 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | E-class P450 group I signature | 355 | 373 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | E-class P450 group I signature | 396 | 420 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | CDD | CYP71-like | 70 | 492 | - | - | |
| Lac3g0134 | 499 | PRINTS | P450 superfamily signature | 356 | 367 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | SUPERFAMILY | Cytochrome P450 | 39 | 496 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | Coils | Coil | 326 | 346 | - | - | |
| Lac3g0134 | 499 | Gene3D | Cytochrome P450 | 27 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0134 | 499 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac10g0511 | Lac-Chr10:3907992 | Lac3g0134 | Lac-Chr3:939346 | 6.00E-118 | dispersed | |
| Lac3g0134 | Lac-Chr3:939346 | Lac4g1424 | Lac-Chr4:32646177 | 1.40E-92 | dispersed | |
| Lac3g0133 | Lac-Chr3:934650 | Lac3g0134 | Lac-Chr3:939346 | 1.50E-76 | tandem | |
| Lac3g0134 | Lac-Chr3:939346 | Lac3g0135 | Lac-Chr3:948468 | 7.40E-198 | tandem |
Pathway information