Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac3g0135 | ATGGACTGTGATCTTCTTCTCCATCTGTTCTTTCATCCACTTTCCCTCACTTCTTTGATCGTCTTCCTCATCTTCCTTCTCCAAAAATGGATGAGCTCTTCATCCTCTTCATCCTCGCCCCCTTCTCCGCCAAAGCAGCTTCCCATTTTCGGGCACCTTTTGAGCTTCGGCTCCCAACCCCATCATCTCACTTTCCAAGCCTATGCCCGCCGCTACGGCCCTCTGTTTCTGCTTCACCTCGGCTCCAAGCCCACCATCGTCGTCTCTTCCCCAGAATTGGCTCGCGAAATCATGAAGACCCACGATCTCATCTTTTCCAACCGACCCAAATCAATCAAAGCCGATAAGCTTCTTTACGGCTCCAAAGATATAGTCGCAGCTCCTTACGGCGAGTACTGGAGGCAGATGAAAAGTGTGGCTGTGCTCCATCTTTTGAGCAACAAAAGAGTTCGATCTTTTCGCTCTGTCAGAGAAGAAGAAGTCAAATTGATGATCGAGAACATCCAACGAAACCCAGCGTCCGTGAATTTGACAGAATTGTTCTCTCAACTGACCAACGACGTGATTTGCAGGGTGGCTTTAGGGAGAAAATATGGGGTGGGAGAAGATGGGAAGAATCTCCACTCTGTTTTGCTGGAGGGGATGAAATTATTGGGGAGTTTTAGTATCAGAAACTTCATTCCATGGCTGGGCTGGATCGATGCTATCACTGGACTGGATGCCAAAATCGAAAGGGTTGTCAAAGAGCTGGATGCTTTCCTAGACAGAGTGATTGAAGATCATGTCAATCCAGAAACTCGTGACGAGCACAAGGACTTGGTGGATGTTCTACTCTGTATACAGAGAGAGAACTCCATGGGTTTTCCCCTGAACATGGATAGCATAAAAGCTTTACTCTTGGACATGTTTGTAGGAGGCAAAGACACGACATACACATTAATGGAGTGGACAATGTCAGAATTGTTGAGACACCCAGATGCCATGAAGAAATTGCAGAGTGAGATCAGAGAAATCACAGGTGACAGAGCCTACGTAGAGGAGGATGATTTGGAAAAGATGCATTACTTGAAAGCAGTAATGAAAGAGACGTTGCGACTACACCCACCAGTCCCACTTCTTTCCCCTCGAGAACCGACTCGATCCGTCAACCTAAAAGGCTACGATATCGAGCCGGGCACTCGAGTTACGATCAATGCATGGGCAATCGGAAGAGACCTGAAAGTATGGGAAGAAGCAGAGGAGTTTCGGCCGGAAAGGTTTATGAAGAGATGGATGGATTTCAAGGGTCAGGATTTTGAGCTAATCCCGTTTGGTGCAGGGAGAAGAGGATGCCCTGGAGTTGTGTTTGCAATGGTAATTGTTGAGATAGCTCTGGCAAATTTGATGCATAAATTTGAATGGAAGTTGCCAAAGGGTGAGGATTTGGACATGTCAGGAACGGTTGGATCAATCAATCATAGAAAAATTCCACTTGTAGCAATGGCAACAACCAACCTTAATTCTTCCTCGAACAAAACTTGA | 1521 | 46.42 | MDCDLLLHLFFHPLSLTSLIVFLIFLLQKWMSSSSSSSSPPSPPKQLPIFGHLLSFGSQPHHLTFQAYARRYGPLFLLHLGSKPTIVVSSPELAREIMKTHDLIFSNRPKSIKADKLLYGSKDIVAAPYGEYWRQMKSVAVLHLLSNKRVRSFRSVREEEVKLMIENIQRNPASVNLTELFSQLTNDVICRVALGRKYGVGEDGKNLHSVLLEGMKLLGSFSIRNFIPWLGWIDAITGLDAKIERVVKELDAFLDRVIEDHVNPETRDEHKDLVDVLLCIQRENSMGFPLNMDSIKALLLDMFVGGKDTTYTLMEWTMSELLRHPDAMKKLQSEIREITGDRAYVEEDDLEKMHYLKAVMKETLRLHPPVPLLSPREPTRSVNLKGYDIEPGTRVTINAWAIGRDLKVWEEAEEFRPERFMKRWMDFKGQDFELIPFGAGRRGCPGVVFAMVIVEIALANLMHKFEWKLPKGEDLDMSGTVGSINHRKIPLVAMATTNLNSSSNKT | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 948468 | 950066 | - | Lag0033663.1 | Lac3g0135 | 600557 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac3g0135 | 506 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | E-class P450 group I signature | 434 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | E-class P450 group I signature | 444 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | E-class P450 group I signature | 184 | 202 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | E-class P450 group I signature | 93 | 114 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | Gene3D | Cytochrome P450 | 26 | 496 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | Pfam | Cytochrome P450 | 41 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | PRINTS | P450 superfamily signature | 435 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g0135 | 506 | CDD | CYP71-like | 71 | 491 | - | - | |
| Lac3g0135 | 506 | PANTHER | CYTOCHROME P450 71B11-RELATED | 19 | 495 | IPR050193 | - | |
| Lac3g0135 | 506 | FunFam | Cytochrome P450 83B1 | 26 | 494 | - | - | |
| Lac3g0135 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 437 | 446 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac3g0135 | 506 | SUPERFAMILY | Cytochrome P450 | 40 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac10g0512 | Lac-Chr10:3936385 | Lac3g0135 | Lac-Chr3:948468 | 1.10E-114 | dispersed | |
| Lac3g0133 | Lac-Chr3:934650 | Lac3g0135 | Lac-Chr3:948468 | 7.10E-58 | dispersed | |
| Lac3g0135 | Lac-Chr3:948468 | Lac4g1424 | Lac-Chr4:32646177 | 1.50E-89 | dispersed | |
| Lac3g0134 | Lac-Chr3:939346 | Lac3g0135 | Lac-Chr3:948468 | 7.40E-198 | tandem |
Pathway information