Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0147 ATGGAACGACGACGGCGACGACGGCCTCTGCTACTTCTACTTCAGCTCTGTACCTTCTTCCTCTTCTTCTCTCGCTCTTATGCAGTCGATTTCTTCTTCGATTCGTTTTCAAACGTCTCGAATGGCACTGACATCATCCTCATTAGCGACGCGAGGTTCGATTCTCCTGTAATTCGCCTCAACAACGACTCGAACCCATTTTCAATCGGGCGAGCTTTCTATCACACGAAGCTGATCATGAGACCCACTTCGAATTCCACTACGATCTCTTCTTTTTCAACTTCTTTTGTGTTCTCAATCTTGCTGGAAGTGGCTACAAGTCCAGGCTTCGGTATGGCCTTTGTTCTTTCCAATTCCACTTCCCCTCCCAACGCCATGGCCAGTCAATACTTCGGTCTCTTCACAAATTCCACAACCCATACCGTTGCTCCACTTCTCGCCGTCGAGTTCGACACCGGCCGAAACACAGAGTTCAACGACCCCGATGATAGCCACATCGGAATCGATTTGAACAGTGTAATTTCAACAAAACAACAGAGCGCTGGGTATTTTGACTCTAGTGGGCAATTTATTCCAATTGAGATGAGAAATGGGCAAAACCTTCGCGCTTGGATCGAATTCGATGGGTCCAATTTCGAAATCAATGTCACAATTGCTCCAGTTGGAATTCCTCGTCCTTCGAGACCCACTTTGAGCTTTAGGGATCCTGAAATAGCGAATTATCTATCGACTGAAATGTTTGTGGGATTTTCAGCATCGAAGACGAGATGGATTGAAGCGCAGAGGATTTTAGCTTGGAGTTTTAGTGACACTGGGACTGCTAGAGAGATTAACACCACAAACTTCCCTGTGTTTATGAGAGAATCGCCACCATCTTCCTTGTCGCAGGGATCTGTTGCCGGCATTGTGATTGGTTGTGTAGTGTTTGTGATCGTAATTTCTGGATTTGGGGGGCTTTGGTATTGGCGAAAGAAAATAGCAAAGGAAGAAGAAGATGAAATTGAGGATTGGGAACTCGAATACTGGCCTCACAGATTCTCGAACGAGGAGCTTAGCCAAGCCACGGATGGATTTTCCGATAACAATCTATTGGGCGCCGGCGGATTTGGAAAGGTGTTCAAAGGAACTTTACCAAACAACACAGAAATCGCCGTTAAGTGTGTAAATCACGATTCGAAACAGGGGCTAAAGGAATTCATGGCTGAAATCTCGAGCATGGGCAGGCTTCAGCACAAAAATCTAGTTCAAATGCGAGGATGGTGTCGAAAAGGCAATCAATTAATGTTGGTGTATGATTATATGCCGAATGGAAGCCTTAATCGGTGGATTTTCGACAGACCCACAACGGTCCTCGGCTGGAAACAGCGCCGCCGTGTGCTGGCCGACGTTGCAGAGGGGTTGAACTATCTTCACCATGGTTGGGACCAGGTGGTGATTCACAGAGACATAAAGTCGAGCAACGTGTTGCTGGATTCGGACATGAGAGGCAGAGTGGGCGATTTTGGGTTGGCGAAACTGTACCAGCACGGCGAGACTCCGAACACCACTCGGGTTGTTGGGACTTTGGGGTATTTGGCGCCGGAGATTGCGACGGTGGCTACTCCGACGGCGGCTAGCGATGTCTATAGTTTTGGGGTTGTGGTTCTCGAAGTGGCGTGTGGGCGGCGGCCGATTGAGATGGCGGCGGAGGAAGAAGAAATAGTGCTTATTGATTGGGTGAGGGATCTTTACGCCGCTGGACGGCTGATTGCGGCGGCGGACTCGAGAATCAAAGGGGAGTTTGAAGTTGAAGAGATGGAGTTGATGTTTAAGCTTGGTTTGGCTTGTTGTCATCCTGACCCTGACCGGCGACCGACGATGAGGGAGGTGGTGGCGGTTCTGATTGGAGAACAGCCAGCGGCCGATGCGGCGGAGTTGCTGTCGTCGGGATTGGCAAGCCAGGCAGTGGACGGCGGAGACTTTGGCTTGTGA 1971 49.47 MERRRRRRPLLLLLQLCTFFLFFSRSYAVDFFFDSFSNVSNGTDIILISDARFDSPVIRLNNDSNPFSIGRAFYHTKLIMRPTSNSTTISSFSTSFVFSILLEVATSPGFGMAFVLSNSTSPPNAMASQYFGLFTNSTTHTVAPLLAVEFDTGRNTEFNDPDDSHIGIDLNSVISTKQQSAGYFDSSGQFIPIEMRNGQNLRAWIEFDGSNFEINVTIAPVGIPRPSRPTLSFRDPEIANYLSTEMFVGFSASKTRWIEAQRILAWSFSDTGTAREINTTNFPVFMRESPPSSLSQGSVAGIVIGCVVFVIVISGFGGLWYWRKKIAKEEEDEIEDWELEYWPHRFSNEELSQATDGFSDNNLLGAGGFGKVFKGTLPNNTEIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKGNQLMLVYDYMPNGSLNRWIFDRPTTVLGWKQRRRVLADVAEGLNYLHHGWDQVVIHRDIKSSNVLLDSDMRGRVGDFGLAKLYQHGETPNTTRVVGTLGYLAPEIATVATPTAASDVYSFGVVVLEVACGRRPIEMAAEEEEIVLIDWVRDLYAAGRLIAAADSRIKGEFEVEEMELMFKLGLACCHPDPDRRPTMREVVAVLIGEQPAADAAELLSSGLASQAVDGGDFGL 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1017958 1019928 + Lag0033675.1 Lac3g0147 600569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0147 656 ProSiteProfiles Protein kinase domain profile. 358 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0147 656 FunFam L-type lectin-domain containing receptor kinase S.4 27 276 - -
Lac3g0147 656 SUPERFAMILY Protein kinase-like (PK-like) 335 627 IPR011009 -
Lac3g0147 656 PANTHER - 56 631 IPR050528 GO:0005886(PANTHER)
Lac3g0147 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 287 IPR013320 -
Lac3g0147 656 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524(InterPro)
Lac3g0147 656 Gene3D Phosphorylase Kinase; domain 1 321 433 - -
Lac3g0147 656 Gene3D Transferase(Phosphotransferase) domain 1 434 640 - -
Lac3g0147 656 Pfam Legume lectin domain 29 281 IPR001220 GO:0030246(InterPro)
Lac3g0147 656 SMART serkin_6 358 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0147 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac3g0147 656 FunFam L-type lectin-domain containing receptor kinase S.1 343 433 - -
Lac3g0147 656 Pfam Protein kinase domain 360 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0147 656 CDD STKc_IRAK 364 627 - -
Lac3g0147 656 CDD lectin_legume_LecRK_Arcelin_ConA 29 272 IPR001220 GO:0030246(InterPro)
Lac3g0147 656 Gene3D - 27 286 - -
Lac3g0147 656 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Lac3g0147 656 FunFam L-type lectin-domain containing receptor kinase S.4 434 639 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0875 Lac-Chr10:7011693 Lac3g0147 Lac-Chr3:1017958 4.80E-127 dispersed
Lac12g0721 Lac-Chr12:7505932 Lac3g0147 Lac-Chr3:1017958 5.30E-127 dispersed
Lac12g2052 Lac-Chr12:37625232 Lac3g0147 Lac-Chr3:1017958 1.00E-66 dispersed
Lac1g1994 Lac-Chr1:41518021 Lac3g0147 Lac-Chr3:1017958 4.80E-112 dispersed
Lac1g1998 Lac-Chr1:41574633 Lac3g0147 Lac-Chr3:1017958 5.70E-132 dispersed
Lac2g2839 Lac-Chr2:44607978 Lac3g0147 Lac-Chr3:1017958 5.90E-72 dispersed
Lac3g0147 Lac-Chr3:1017958 Lac5g1851 Lac-Chr5:36725821 2.30E-98 dispersed
Lac3g0147 Lac-Chr3:1017958 Lac10g3126 Lac-Chr10:45578603 1.10E-137 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86046 PF00069 Pkinase 5.30E-51 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0147 - - - 0.0