Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0209 ATGGCGTTGTTGCGCAAATTGTTCTTCCGGAAGCCGCCCGATGGGCTTCTCGAGATCTGTGAAAGAGTTTATGTTTTTGATTGCTGTTTTACCACGGATGCTTGGAAGGAAGAGAATTATGAAGTTTACTTAAGTAGAATAGTTGCTCAACTCCGAGAACATTTAGCAGACGCATCATTCTTGGTGTTCAATTTTAGGAAATTAGAGATGAAAAGTCAGATGGGCGATATCTTATCTAAGTATGATATGACCATAATGGACTACCCTCAGCAGTACGAGGGTTGCCCAGTTCTGACAATGGAAGTGCTTCACCATTTTCTAAGATCATGTGAGAGTTGGCTTTCCCTTGGGCAGAATAATGTTTTATTAATGCACTGTGAACGTGGTGGTTGGCCGGTTTTAGCTTTCATGCTTTCGGCTCTCTTGATTTATAGGAAACAATATAGTGGGGAGCAAAGGACATTGGACATGGTTTATAGGCAGGCACCTCGGGAACTTTTGCATCTTTTGTCTCCTATGAATCCAGTTCCTTCTCAACTAAGGTTTCTGCAATATGTCGCAAGGAGGAATGTAGCCTTAGAATGGCCACCTATGGACAGAGCTCTAACTTTGGATTGTATCATTTTGAGATTTATTCCAAATTTTGATGGAGAGGGTGGTTGCCGTCCAATATTTCGAATATATGGACAAGATCCTCTGCTTGTCAGTGATCGAACTCCTAAAGTTCTGTATTCAACTCCAAAAAGAAGCAAAAATGTCCGTACTTACAAACAGGCAGAATCAGAACTGGTTAAGATTGATGTTAATTGCCATATTCAAGGTGATGTTGTTCTTGAGTGCATCTCCTTGCATGACGACATGGAATTTGAAGAGATGATGTTCAGAGCAATGTTTAATACTGCTTTTATTCGCTCTAATATTTTAATTCTGAACCGTGAAGAAATCGACACTTTGTGGAACGCTAAAGATAAATTTCCAAAGGAATTTCGAGCAGAGATTATTTTCTCTGAGATGGATGCTGGAACTTGTACTGTTGCAAATGATATACTTTGCTTTGACGAGGAAGGTCTCCCCGTGGAAGCATTTGCTAAAGTGCAAGAGATCTTTAGTCATGTGGATTGGTTAGATCCCAAAGCAGATGTTGCCCTTAATGTGCTCCATCAGATGAATGCCTTAAACATAGCCCAGGAAAAATCAGACACTAATTCTCTTTGGAGTACGCAAGTTAGTCCTTTACTCCAGTCTACAAGTCCCAGAAAACTTCCGCAGAAGAAGTCCACATTGGAGAACAAAACTAAAATCCTAGAGAAGGAAGAGCCTATTCCAACATCAAAGTTTTCCCCGCGTGCTGCTAAAACTAAACAGAACAATGAATCTGATTCAGTATTCCAACAGGTGCCTCAATCTTTAGAATCTTTCTCACTCAGCTATGACTTTTTTCAAGACTCACCAAATTCAGAGAGAAGCGACAGGACCTCCTTCAGTGTTTCGGAAGGAGAAACAGAGGTTTCTAATCTGAAAACTGCATCTTCATCTTTTCCAGATGCAGCATTGCATGTTTCTCTTGCTCCTGAACCTCTTCAGACTAAAAGTTACCTTACAGAAACAACAATACCACCACCTCCTCCTCTTCCCCAACTTTCCACGAATATTTCTGCTGTTAATTCTCTACCTTATCCTCCCCCTCCTCCAACTGCATCACCACTTCCGTCTAATAACTTTTCAACTCTAAGACCGGATAAATCTTCACTAACCGAGGAAATAGAAAACTATTCAGAGGATCAAAGTCAGTTACCAACCATTAGCCCTTCCCTGTCTGTAACCTCTGCAATTAGTTCCTCAATACAGTCTTCTCCACCACCTCCTCCACCTCCTCCTTCTACACCTCCTTTGAAGGATACCATAGCAGTTAGAGTTAAAGCTTCTCCACCACCACCCCCTCCTTTTCCTTCAACATTAGCTTCCCATCCTACGATTGCATCCTTAGTGCCTCAGCCACCGCCACCACCACCACCACCGTTTCCTCCTTCAACATCCACTGTAAATCATAAAATTTCATCTCCAATCCCTTCACCACCACCATCACCACCTCCTCCTCCAATGGCCATCACAGATCCTAAAATTTCCTCTCCAGTGCCTCTGCCTCCACCGCCACCACCTCTTCCTATGACGTCCAAACAGGTTGAGAGTACTTCAACATCTCCATTTGCTCCGCCACCACCACCACCACCACCTCTTCCTATGACGTCCAGGCAGGTTGGAGGTACTTCAACATCTTCGCCTGTTCCTCCACCGCCACCACCTCTTCCATCTAGACAGGTTGGAAGTACTTCAACATCTCCATCTGTTCCTCCTCCTCCACCACCACCTGCTTGCACCACAGGCTCCTCCTCACATGTTCCTTGTGCTCCCCCTCCTCCTAACCTTTCTGGGAGAGGGACTTCAAAATCTGGTGAATTGTTTCCTGGTTCTCTTCTTGGAAATGGTTTGTCTAGGTCTTCATCTCCAGGGCCACCGAGTATTTCTCCATCAAGTTCAAAGGGACGAAGTTTGTCACGCACTATAAGTTCAAGAACACATATAACCAAGAAACTGAAGCCATTGCATTGGTTAAAGTTATCTAAAGCAGTGCAAGGAAGCTTATGGGCTGAAACTCAAAAAACTGGTGAAGCTGCCAGGGCACCAGAGATTGACATGTCAGAACTTGAAAGTCTTTTCTCTGCAGCAGTTCCTGCTACTGATCCAAACACGAAGTCAAGTGGACGCGGTTCAGTTGGGAATAAACCTGAGAAAGTGCAACTGATCGATCACAGGCGAGCTTACAATTGTGAAATCATGCTTTCAAAGGTCAAGGTGCCTTTGCAGGATTTAATGAGTTCTGTGCTTGACCTTGAAGATTCAGCGCTGGATATCGATCAGGTTGAGAATCTTATTAAGTTTTGTCCGACAAAGGAGGAAATGGATTTACTCAAGGCCTACCCCGGAGAAAAGGAGAAGCTTGGAAAATGTGAACAGTTCTTCTTAGAGTTGATGCAAGTACCTCGTGTAGAGTCAAAACTTCGAGTTTTCTCATTCAAGATACAATTCAGCTCTCAGGTCACTGACCTCAAAAAAAGCCTGAACTTTGTTAACTCTGCTGCAGAAGAGATAAAAAGTTCAGTCAAGTTGAAGAGAATCATGCAGACAATACTATCTCTAGGAAATGCTTTAAACCAGGGAACAGCGAGGGGCTCTGCTATAGGATTTAGGCTGGATAGCCTTCTTAAACTGACAGAAACTCGTGCACGAAACAACAAGATGACTCTAATGCATTATCTTTGCAAGATACTTGCTGACAAACTGCCAGAAGTTCTGGATTTTACTAAAGATCTTGCAAGCTTGGAGCCTGCGTCAAAGGTACAATTGAAGGTTTTGGCAGAGGAGATGCAAGCAATTAGCAAAGGGTTGGAGAAAGTTGTTCAAGAATTGTCTACATCTGAAAATGATGGCCCTATATCCAATAATTTCCGAATGGTTTTAAAGGAGTTCCTTCGTTTTGCTGAAGCTGAAGTGAGAACTTTGGCTTCCCTGTACTCTAGCGTGGGTAGAAATGTAGATTCTTTGATTCTTTATTTTGGAGAAGATCCAGCTCGCTGCCCCTTTGAACAAGTTATGTCAACCTTATGCAACTTTGTGAGAATGTTTAACCGAGCCCACGAGGAAAACTGCAAGCAGATCGAGCTCGAAATGAAGAAAGCAACTGAAAGCGAAAAATCAAAGGCGGGGCACTTGCATAAGAGGACGAGGACGAGACAATTATCACACTCACAGATTGAGATTGGCAATGTCAACAACACTGGCAGATCGAGCTTTATCCTGTTGTTCATTGTGCTGAGCAGGCTGCTTGTATCGAAAACTGAACAAATTCTTTTGTGTACATAA 3921 43.08 MALLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWKEENYEVYLSRIVAQLREHLADASFLVFNFRKLEMKSQMGDILSKYDMTIMDYPQQYEGCPVLTMEVLHHFLRSCESWLSLGQNNVLLMHCERGGWPVLAFMLSALLIYRKQYSGEQRTLDMVYRQAPRELLHLLSPMNPVPSQLRFLQYVARRNVALEWPPMDRALTLDCIILRFIPNFDGEGGCRPIFRIYGQDPLLVSDRTPKVLYSTPKRSKNVRTYKQAESELVKIDVNCHIQGDVVLECISLHDDMEFEEMMFRAMFNTAFIRSNILILNREEIDTLWNAKDKFPKEFRAEIIFSEMDAGTCTVANDILCFDEEGLPVEAFAKVQEIFSHVDWLDPKADVALNVLHQMNALNIAQEKSDTNSLWSTQVSPLLQSTSPRKLPQKKSTLENKTKILEKEEPIPTSKFSPRAAKTKQNNESDSVFQQVPQSLESFSLSYDFFQDSPNSERSDRTSFSVSEGETEVSNLKTASSSFPDAALHVSLAPEPLQTKSYLTETTIPPPPPLPQLSTNISAVNSLPYPPPPPTASPLPSNNFSTLRPDKSSLTEEIENYSEDQSQLPTISPSLSVTSAISSSIQSSPPPPPPPPSTPPLKDTIAVRVKASPPPPPPFPSTLASHPTIASLVPQPPPPPPPPFPPSTSTVNHKISSPIPSPPPSPPPPPMAITDPKISSPVPLPPPPPPLPMTSKQVESTSTSPFAPPPPPPPPLPMTSRQVGGTSTSSPVPPPPPPLPSRQVGSTSTSPSVPPPPPPPACTTGSSSHVPCAPPPPNLSGRGTSKSGELFPGSLLGNGLSRSSSPGPPSISPSSSKGRSLSRTISSRTHITKKLKPLHWLKLSKAVQGSLWAETQKTGEAARAPEIDMSELESLFSAAVPATDPNTKSSGRGSVGNKPEKVQLIDHRRAYNCEIMLSKVKVPLQDLMSSVLDLEDSALDIDQVENLIKFCPTKEEMDLLKAYPGEKEKLGKCEQFFLELMQVPRVESKLRVFSFKIQFSSQVTDLKKSLNFVNSAAEEIKSSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKILADKLPEVLDFTKDLASLEPASKVQLKVLAEEMQAISKGLEKVVQELSTSENDGPISNNFRMVLKEFLRFAEAEVRTLASLYSSVGRNVDSLILYFGEDPARCPFEQVMSTLCNFVRMFNRAHEENCKQIELEMKKATESEKSKAGHLHKRTRTRQLSHSQIEIGNVNNTGRSSFILLFIVLSRLLVSKTEQILLCT 1306
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 1483722 1494726 - Lag0033737.1 Lac3g0209 600631
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0209 1306 MobiDBLite consensus disorder prediction 827 858 - -
Lac3g0209 1306 Coils Coil 1229 1249 - -
Lac3g0209 1306 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 186 IPR029021 -
Lac3g0209 1306 Pfam Formin Homology 2 Domain 862 1229 IPR015425 -
Lac3g0209 1306 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 424 443 - -
Lac3g0209 1306 Gene3D - 196 340 - -
Lac3g0209 1306 SUPERFAMILY Formin homology 2 domain (FH2 domain) 868 1245 - -
Lac3g0209 1306 SMART PTEN_C2_2 197 337 IPR014020 -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 415 464 - -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 533 859 - -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 616 631 - -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 448 464 - -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 1247 1266 - -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 909 928 - -
Lac3g0209 1306 Gene3D Formin, FH2 domain 854 1239 IPR042201 -
Lac3g0209 1306 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Lac3g0209 1306 Pfam C2 domain of PTEN tumour-suppressor protein 198 337 IPR014020 -
Lac3g0209 1306 SMART it6_source 534 1299 IPR015425 -
Lac3g0209 1306 ProSiteProfiles Formin homology-2 (FH2) domain profile. 855 1254 IPR015425 -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 910 926 - -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 780 808 - -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 687 724 - -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 589 615 - -
Lac3g0209 1306 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Lac3g0209 1306 PANTHER FORMIN-J 737 1253 IPR051144 -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 661 678 - -
Lac3g0209 1306 MobiDBLite consensus disorder prediction 734 749 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2471 Lac-Chr11:40930121 Lac3g0209 Lac-Chr3:1483722 7.60E-255 dispersed
Lac3g0209 Lac-Chr3:1483722 Lac3g0591 Lac-Chr3:4581722 3.80E-225 dispersed
Lac2g0546 Lac-Chr2:4064488 Lac3g0209 Lac-Chr3:1483722 0.00E+00 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0209 K28090 - csv:101221713 1892.47