Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0373 ATGAGAATTTGTAATATCCGAGGGAATTTTATACTTCACCACTGGTTTACCTCTTTCGTCAAAAACTATGTTGGTTTTGTGTCATCATCTGTTCAGCTCAAGCATTTTCAGCACACTCCAACGATCAGCTTAACTTCCAACACAAAATGCAAAGATAATATAACAGATAACTCCAGATGCAAAGACAATAAAACAGATAACTCTAGAAGCAAAGAGAATAAAACAGAGAAGGGGAAACCTGAATTGAATATCTGGTTGCAAGCTTCTTCCTTTATGTTTTGCAGGCCAACTGAGGAATGCCTCGCCGAATACTCGAAGATATGGAAACTGAACATTAACTTTGGCCTTTGTCTTGGCAAGAAGTTTCAAATTGTAGGAGCTTTCCCTGTTTCTTGTAATGTTCATACTGATTCAATTTGCTCGTTGAAATCAACAAAATTTACATGCTGTTGTTTCAGGAACCTCTCAAAATCAGATGATGAGCTCCTCATCTGTGATAAATGCTCCAGTTTTCTTCTTTTTCCTTGGGATGCTAGCTGTGCTGCTTCAGCAGATTTGTTAAGCGAGAACCTCCACTCAATAAGTTACTTTGACTTTCACACACTGAAAAATGCAACAAAGAATTTTAATCCGGAATATCTTCTGGGCCAGGGAGGATTTGGACCTGTCTATCTGGGAACGCTAGAAGATGGAAGATTGGTTGCAATTAAGAAACTTTCACTTAACAAATCCCAACAAGGAGAACCAGAATTTTTATCAGAGGTCAGACTGATAACAAGCATCCAACACAAGAACCTTGTTCGCCTGCTTGGTTGTTGCTCAGATGGACCTCAACGGCTTCTCGTGTATGAATACATGGAGAACAGGAGCTTGAATCTCATAATATATGGGGGAAGTGACCAATTCCTCAACTGGAACACCAGACTGAAGATTATCAGAGGCATTGCCAAAGGGTTGCAGTATCTACATGAGGATTCCCATCTAAGAATTATTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAATTTCAACCGAAGATTGGTGATTTTGGGCTGGCCAGGTTCTTCCCTGATGACCAAGCTTACCTTAGCACTACATTTGCTGGAACTCTAGGTTACACAGCACCAGAATATGCAATTAGAGGAGAACTGTCAGAGAAGGCCGATGTATACAGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTGGCAGAAAAAACACAAATCTTTCTTTACCAACCGAAATGCAGTATCTTCCTGAATATGCATGGAAACTATATGAGAGGTCTGCAGTAATCGAACTTGTGGATCCAAAGATGAAGGATGGTGAATATGCGGAGAAGGATGTAGCACATGCAATTCAGGTTGCTTTGTTGTGTCTTCAGCCTCATGGAAGTCTGAGACCTGCAATGTCTGAGATTGTTGCCATGCTAACATACAAATTTGAAATCGTTCAAACACCTTTGAAACCAGCTTTCTTGGAAAGAAGGCATAGAAAGAACAGAGATCTCTCGTTGACTAATTATGCAGATACTATTCCTTCTCCTTTACAGTGA 1563 40.12 MRICNIRGNFILHHWFTSFVKNYVGFVSSSVQLKHFQHTPTISLTSNTKCKDNITDNSRCKDNKTDNSRSKENKTEKGKPELNIWLQASSFMFCRPTEECLAEYSKIWKLNINFGLCLGKKFQIVGAFPVSCNVHTDSICSLKSTKFTCCCFRNLSKSDDELLICDKCSSFLLFPWDASCAASADLLSENLHSISYFDFHTLKNATKNFNPEYLLGQGGFGPVYLGTLEDGRLVAIKKLSLNKSQQGEPEFLSEVRLITSIQHKNLVRLLGCCSDGPQRLLVYEYMENRSLNLIIYGGSDQFLNWNTRLKIIRGIAKGLQYLHEDSHLRIIHRDIKASNILLDDKFQPKIGDFGLARFFPDDQAYLSTTFAGTLGYTAPEYAIRGELSEKADVYSFGVLVLEIISGRKNTNLSLPTEMQYLPEYAWKLYERSAVIELVDPKMKDGEYAEKDVAHAIQVALLCLQPHGSLRPAMSEIVAMLTYKFEIVQTPLKPAFLERRHRKNRDLSLTNYADTIPSPLQ 520
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 2804742 2807053 + Lag0033901.1 Lac3g0373 600795
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0373 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac3g0373 520 ProSiteProfiles Protein kinase domain profile. 209 485 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0373 520 FunFam Cysteine-rich receptor-like protein kinase 2 286 488 - -
Lac3g0373 520 CDD STKc_IRAK 215 481 - -
Lac3g0373 520 FunFam Cysteine-rich receptor-like protein kinase 10 175 285 - -
Lac3g0373 520 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 503 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Lac3g0373 520 Gene3D Transferase(Phosphotransferase) domain 1 286 489 - -
Lac3g0373 520 SMART serkin_6 209 482 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0373 520 SUPERFAMILY Protein kinase-like (PK-like) 189 481 IPR011009 -
Lac3g0373 520 Gene3D Phosphorylase Kinase; domain 1 181 285 - -
Lac3g0373 520 Pfam Protein kinase domain 213 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0373 Lac-Chr3:2804742 Lac5g2414 Lac-Chr5:42790269 4.40E-84 dispersed
Lac3g0373 Lac-Chr3:2804742 Lac13g0181 Lac-Chr13:1270615 4.30E-79 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86056 PF00069 Pkinase 4.70E-47 CL0016 Lac PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0373 - - - 0.0