Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0381 ATGAAGAACTTGCCTCTCTATTTCCTCCGATCTCCGCCGTCTCTTCGGCTGCCGCTGTCGGCCGCCAACCCTTTCTTGTCACACCTCTCCCATTTCATGACCTTGTCTCTCTTAGGCTTCGGAGCTCTAAAGCTCGCCAAAACTAGAACCTCCTCCTCCCCAAACGACCTCGACATCTTCTTCACCTCGGTCTCGGCCGTCACTGTTTCGAGCATGTCTGTCGTTGAAATGGAAGTTTTTTCCAACATCCAACTCCTCATCATCACCACCCTCATGTTCCTCGGCGGCGAAGTCTTCGTCTCCGCCATTGGATTCCAACTCTCCCGCCAATTTAAATCTTTGAACGAACAAAAACAAGTCGGTTCGGTCGGTTTGGATCGGCCCACCGACTCGGGCACCTACGGCCTCGAGTTGGAAAGTGGGTCGACAAGGACGGCCACCGTTGATGAGTTGAGTATCTCAAAATCGTCTTTGAAAGTTTTGGGTCGTGTGATAGTTGGGTATCTTTTGGCGACGAATGTTCTTGGTTCTAGTTTGATCTTCATCTACATCATTATGGTACCCCAAGCAAAGCAACTACTTCAAAGCAAAGGCATCAATTTCCTCACTTTTTCAATTTTCAGTACGGTTTCTACTTTTACCAACTGTGGATTCATACCCACTAACGAAAATATGATTGTGTTCAAGAACAACTCCGGACTTTTGCTCATACTTATCGCGCAGGTGCTTCTCGGAGGCTGTTTGTATCCAGTCGGTCTCTGGTTGGTGATAATGGCGGCGGCGAAGGTGACGGGGAAGAAGGAATTCAGATACATATTGAAGAACTACTCAGAGATGGGCTATTCTCATCTCTTGCCGGGGCTCCGGTGTGGTTTTCTGGTGGTGACGGCGGTGGGATTCATAGTTTTGCAGTTGATCATATTTTGCTCGTTGGAATGGAACAACTCCGGCGGAATTTGGGATGGCATGAATCCGTACGAGAAATTTGTGGGCTCACTTTTTCAGGTGACGAACTCAAGACATGCCGGAGAATCGGTGGTGGACATATCGGTGATCTCGCCGGCGATCTTGGTGGTCTTTGTTGTCATGATGTATCTCCCACCATACACAACTTTTTTACCAACAAGGAATAATAAAGAGAGAGTTTCAATGGCCAATGGGAAATGCAAGAGACAACACTTGGTGGAATTGTTGACATTTTCACAGCTCTCTTATTTGGCAATTTTCATCATTCTCATATGTATCACAGAGAAAGAAAAGCTAAGAGATGATCCTCTCAACTTTACTGTGCTCAACATCACCCTTGAAGTCATCAGTGCATATGGAAATGTTGGGTTCTCAAGTGGCTATAGCTGCAAAAGACAAGTGAAAGCTGATAGCTCTTGCAAAGATGCATGGTATGGATTCTCTGGAAGATGGAGTGGAAAAGGAAAATTCATTCTCATTCTTGTCATGATCTTTGGAAGAATGAAAAGTTTTAGTATGCATGGTGGAAGAGCATGGAAATTCTCATAG 1515 45.74 MKNLPLYFLRSPPSLRLPLSAANPFLSHLSHFMTLSLLGFGALKLAKTRTSSSPNDLDIFFTSVSAVTVSSMSVVEMEVFSNIQLLIITTLMFLGGEVFVSAIGFQLSRQFKSLNEQKQVGSVGLDRPTDSGTYGLELESGSTRTATVDELSISKSSLKVLGRVIVGYLLATNVLGSSLIFIYIIMVPQAKQLLQSKGINFLTFSIFSTVSTFTNCGFIPTNENMIVFKNNSGLLLILIAQVLLGGCLYPVGLWLVIMAAAKVTGKKEFRYILKNYSEMGYSHLLPGLRCGFLVVTAVGFIVLQLIIFCSLEWNNSGGIWDGMNPYEKFVGSLFQVTNSRHAGESVVDISVISPAILVVFVVMMYLPPYTTFLPTRNNKERVSMANGKCKRQHLVELLTFSQLSYLAIFIILICITEKEKLRDDPLNFTVLNITLEVISAYGNVGFSSGYSCKRQVKADSSCKDAWYGFSGRWSGKGKFILILVMIFGRMKSFSMHGGRAWKFS 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2865791 2872284 + Lag0033909.1 Lac3g0381 600803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0381 504 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 20 500 IPR051143 GO:0005886(PANTHER)|GO:0008324(PANTHER)
Lac3g0381 504 Pfam Cation transport protein 154 494 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0379 Lac-Chr3:2834575 Lac3g0381 Lac-Chr3:2865791 2.00E-73 dispersed
Lac3g0380 Lac-Chr3:2839202 Lac3g0381 Lac-Chr3:2865791 1.30E-119 tandem
Lac3g0381 Lac-Chr3:2865791 Lac3g0382 Lac-Chr3:2892792 1.10E-79 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0381 K24976 - csv:101206239 755.362