Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0430 ATGGGGAGTGGAACTCTCGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGCACTTCTTCTTCTTCTTCTTCTTCTTCTAATTCTAATTCTAATTTTGGTCGTAATTCTGATTCTGATTCTAATCTCAATTACCCTAATAATAATAAGCTCCATTATGTCGATAATGGTGGTGACAATGGTGGCCAATTGTTGAGTAGCGATTTACGCGCCCAATCGTCCATTCCCCCCAAACGCAAACCTCTTCGAAAACAAACCCATCTCCAAGGAGAAGGGATTCTTCAGCAATTGCCTGAGGAGGAGGACGACGTCGACGACCTTGATTACTCTGCCTTGAAGCTCATCAAAGTTCCTAAGCGGACCAATCACCTCAGACCTCCTCCTCCTCCTCTTCCTCCTCCTCCTGCTTCAATGGACTCCCACAAGAAGGGTGGATTGGAAACAGAATTTTTCACAGAGTATGGAGAGGCCAGCAGATATCAGGTTCAAGAAATCATTGGTAAAGGAAGCTACGGGGTTGTTGGGTCTGCCATTGATACTCATACTGATGAGAAGGTCGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTTTCTGATGCCACAAGAATTTTAAGAGAAATTAAACTCCTACGGTTGCTTCGTCATCCCGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGACCTTCACCAAGTAATTAAGGCCAATGATGATCTCACTCCTGAGCACCATCAGTTCTTCTTGTACCAGCTTCTTCGTGGTCTGAAATATATACATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAGAACATTTTAGCTAATGCCGACTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGTGTATCATTTAATGATGCTCCATCTGCTATTTTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCTCCCGAACTTTGTGGCTCTTTTTTCTCGAAATACACTCCTGCAATTGATATTTGGAGCATTGGTTGCATATTTGCGGAAATGCTCACTGGAAAGCCACTGTTTCCTGGGAAAAATGTGGTTCACCAACTGGATCTGATGACTGATGTGCTTGGCACACCTTCTGCTGAGTCCATTGCTAGGATTCGAAATGAAAAAGCAAGAAGATACCTGAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAGTTCCCCAATGCTGATCCCCTGGCTCTCCGCTTACTTCAGCGCCTGCTTGCATTTGATCCCAAAGATCGTCCTACAGCTGAAGAGGCATTAGCTGATCCTTACTTTCATGGTTTGGCCAATGTGGATCGGGAACCATCAACTCAACCAATTTCAAAACTTGAGTTTGAATTTGAGAGAAGAAAGTTGACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATCTTGGAGTATCATCCTCAGATGCTGCAGGAATATCTCCGCAGTGGAGAACAAACTAGTTTCATGTACCCAAGTGGTGTTGATCGCTTTAAACGCCAGTTTGCACATCTAGAGGAACATTATGGTAAGGGTGAAAGAAGTACTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGGTTTGTGCACCCAAGGATGAGGTTGAACAGCACAATGATATAGAAGGAAGAAATGGTGCATATGTTGCTACGTCTCTTCAGAGTCCTCCAAGGTCACAAGGGGATGGTTCGGAAAATGCAAATGGTAACGAACAAAATGGACCAAACAAGGCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCCTCTAAATGTATAGGTGTCAAACCGAAAAAAGACCTAGAGGAGGAACCAATTACGGAGACTAACGACGAGGCAATCGATGGGTTGTCTCATAAGGTTTCAGCCTTGCATACTTGA 1962 43.02 MGSGTLVDGVRRWFQRRTSSSSSSSSNSNSNFGRNSDSDSNLNYPNNNKLHYVDNGGDNGGQLLSSDLRAQSSIPPKRKPLRKQTHLQGEGILQQLPEEEDDVDDLDYSALKLIKVPKRTNHLRPPPPPLPPPPASMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAIDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCAPKDEVEQHNDIEGRNGAYVATSLQSPPRSQGDGSENANGNEQNGPNKANYSARSLLKSASISASKCIGVKPKKDLEEEPITETNDEAIDGLSHKVSALHT 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3293053 3298729 + Lag0033958.1 Lac3g0430 600852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0430 653 Pfam Protein kinase domain 159 450 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0430 653 MobiDBLite consensus disorder prediction 571 602 - -
Lac3g0430 653 CDD STKc_TDY_MAPK 158 495 - -
Lac3g0430 653 ProSitePatterns MAP kinase signature. 194 297 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0430 653 MobiDBLite consensus disorder prediction 548 564 - -
Lac3g0430 653 Gene3D Phosphorylase Kinase; domain 1 175 496 - -
Lac3g0430 653 MobiDBLite consensus disorder prediction 121 136 - -
Lac3g0430 653 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 156 491 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Lac3g0430 653 MobiDBLite consensus disorder prediction 619 653 - -
Lac3g0430 653 ProSitePatterns Protein kinases ATP-binding region signature. 165 189 IPR017441 GO:0005524(InterPro)
Lac3g0430 653 FunFam Mitogen-activated protein kinase 474 496 - -
Lac3g0430 653 ProSiteProfiles Protein kinase domain profile. 159 450 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0430 653 MobiDBLite consensus disorder prediction 1 65 - -
Lac3g0430 653 SUPERFAMILY Protein kinase-like (PK-like) 155 455 IPR011009 -
Lac3g0430 653 MobiDBLite consensus disorder prediction 14 65 - -
Lac3g0430 653 FunFam Mitogen-activated protein kinase 148 253 - -
Lac3g0430 653 SMART serkin_6 159 450 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0430 653 MobiDBLite consensus disorder prediction 529 602 - -
Lac3g0430 653 Gene3D Transferase(Phosphotransferase) domain 1 245 473 - -
Lac3g0430 653 MobiDBLite consensus disorder prediction 119 140 - -
Lac3g0430 653 FunFam Mitogen-activated protein kinase 245 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0281 Lac-Chr10:2129564 Lac3g0430 Lac-Chr3:3293053 4.10E-207 dispersed
Lac12g2338 Lac-Chr12:40554997 Lac3g0430 Lac-Chr3:3293053 1.50E-207 dispersed
Lac3g0430 Lac-Chr3:3293053 Lac9g2254 Lac-Chr9:41888913 6.70E-199 dispersed
Lac3g0430 Lac-Chr3:3293053 Lac13g1491 Lac-Chr13:15018366 5.30E-212 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86059 PF00069 Pkinase 2.00E-68 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0430 - - - 0.0