Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0449 ATGGCAAAGGGAAAACTTTTCTCTGAGAAAATTAAGCTCATTCTTGCCTTGATTGCTTTGCAGCTCTGCTATGCAGGTTTTCACATTGTGTCAAGAGTTGCTTTAAACATTGGTGTTAGTAAAGTCGTCTATCCGGTTTATCGAAACGCAATCGCTTTAGCTCTGTTGAGTCCTTTTGCTTATTTCCTAGAGAAGAATGAAAGGCCTCCTCTTACTTTTTCTTTGCTGTTTCAGTTCTTCCTTCTAGCTTTACTGGGAATCACTGCCAATCAAGGATTCTATCTCTTGGGACTAAACTATGCATCTCCAACTTTTGCTTCTGCAATGCAAAACTCAGTTCCTGCAATTACCTTTATCATGGCTTCTGTTCTGAGGCTTGAGCAAGTCAACTTCAGAAGGATAGATGGTTTGGCCAAGCTTTTGGGAACCATTGGAAGTGTTGGTGGTGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTCTCCACAACAAGTACTTAACTCAAGGAAATGGCATCTTAGAGATGGATGACCCTACAAGTAAAGTGCAGAATTGGAGATGGGGTTGTATATACCTGCTAGGCCACTGCCTTTCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTGTATTGAAAAAGTATCCAGCAAAGCTAACAATAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATAGCTGGCTTTGTGGAAACAGACTATCAGTACTGGAAAATCCAATCTGCAGAAGAACTCTTCACAATCCTATATGCTGGTGTTGTAGCCTCTGGCATTGTGATCTCACTCCAAACATGGTGCATCCACAAAAGTGATCCTGTTTTTGTTGCTGTCTTCCAGCCTCTCCAAACATTCCTAGTAGCCATCATGGCGTTTCTCATCCTCGGTGACCGGTTATTCTCCGGCGGGGTTATTGGTGCTGTTCTTATAACACTTGGACTTTACTTGGTTCTATGGGGAAAAAATAAAGAAAAGGCATTGGAAGAACAGGACAAGTCTTTGAAACAGCCCCTTTTGGAGGATCAAAGAGGGGACAAAGAAGACAATGTTGTTTCAGACATACCATGA 1092 42.4 MAKGKLFSEKIKLILALIALQLCYAGFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERPPLTFSLLFQFFLLALLGITANQGFYLLGLNYASPTFASAMQNSVPAITFIMASVLRLEQVNFRRIDGLAKLLGTIGSVGGATVITLYRGPPLLHNKYLTQGNGILEMDDPTSKVQNWRWGCIYLLGHCLSWAGWMVFQASVLKKYPAKLTITSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTILYAGVVASGIVISLQTWCIHKSDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGVIGAVLITLGLYLVLWGKNKEKALEEQDKSLKQPLLEDQRGDKEDNVVSDIP 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3424358 3426328 - Lag0033977.1 Lac3g0449 600871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0449 363 PANTHER WAT1-RELATED PROTEIN 16 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac3g0449 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 331 - -
Lac3g0449 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 138 - -
Lac3g0449 363 Pfam EamA-like transporter family 13 137 IPR000620 GO:0016020(InterPro)
Lac3g0449 363 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0965 Lac-Chr2:7629148 Lac3g0449 Lac-Chr3:3424358 9.30E-61 dispersed
Lac3g0449 Lac-Chr3:3424358 Lac6g0461 Lac-Chr6:3765178 3.40E-99 dispersed
Lac3g0449 Lac-Chr3:3424358 Lac2g0178 Lac-Chr2:1356589 2.30E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0449 - - - 0.0