Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac3g0479 | ATGCGTATGAGCTGTAATGGATGCCGTGTTCTTCGCAAAGGCTGTAGTGAAACCTGCTCCATCAGACCCTGTCTTCAATGGATCAAAAGCCCCCAATCCCAAGCCAACGCCACCTTCTTCCTCGCCAAATTCTACGGCCGAGCCGGCCTCGTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCAGCTATTTTTAAATCTTTGCTATTCGAGGCCTGTGGCCGGATCGTGAACCCGATTTTCGGGTCGGCCGGATTGTTGTGGTCCGGGAGCTGGCAGCTGTGCCAGGACGCCGTCGAAGCCGTTCTGAAAGGCGCGCCGATTCTGCCGGTTTCATCCGAGACGGCGGCGTCGCACATGGGCCCTCCCTTGAAGGGCTGCGACATCCGTCACGTGTCCAAGCAGCAAGGCTCCGCTGCCGGTTCAGCGCTCCGGAAGATCAAGACGAGGCGGCGGTTCAAGCGCTCGGCGGCGGCGGCGAACAAGTCCAAGCCGAAGGAGGAGCCGGTGGCGGTAACCGAGTTCGTATTCGACGACCCGACCCGGGTTGTGTCGGAGCCCCGGTGTTTGAAGTTCGAGTTGGATAATTGGGTGGGCCATGAGTCGCCGGAGAAGGACTGCGGCAGCGACGACGCCGAGTGCTTATCGGTGGAGACTGTGGAGGCTTCTTCGGTGGGCCAGGGTGGTGACGTGGAATTGGAACTTACCTTGGGGTTTGGGCACAGTCAGATGCTGAGGTGA | 744 | 60.08 | MRMSCNGCRVLRKGCSETCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASHMGPPLKGCDIRHVSKQQGSAAGSALRKIKTRRRFKRSAAAANKSKPKEEPVAVTEFVFDDPTRVVSEPRCLKFELDNWVGHESPEKDCGSDDAECLSVETVEASSVGQGGDVELELTLGFGHSQMLR | 247 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3652801 | 3653637 | + | Lag0034007.1 | Lac3g0479 | 600901 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac3g0479 | 247 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 240 | - | GO:0010468(PANTHER) | |
Lac3g0479 | 247 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 102 | IPR004883 | - | |
Lac3g0479 | 247 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g2647 | Lac-Chr1:47799439 | Lac3g0479 | Lac-Chr3:3652801 | 2.30E-40 | dispersed | |
Lac2g0382 | Lac-Chr2:2820811 | Lac3g0479 | Lac-Chr3:3652801 | 2.80E-31 | dispersed | |
Lac11g0176 | Lac-Chr11:1645405 | Lac3g0479 | Lac-Chr3:3652801 | 2.50E-67 | transposed | |
Lac13g0499 | Lac-Chr13:3647499 | Lac3g0479 | Lac-Chr3:3652801 | 1.90E-52 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
23575 | PF03195 | LOB | 6.30E-22 | No_clan | Lac | TF |
Pathway information
