Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0494 ATGACTTGGAGGAGAGTGTTGAAGTCCGTGCAGGCACTTTTGGCCCACGGTTCACTCTTCTGTTTCACGCTCTTGCTCGTTCTCAAGCTCGATCATTTCGTCTCCCACAGTTGGTGGGCTGTTTTTTTCCCTCTTTGGGTGTTTCATGTGGTTGTTGCTCGAGGAAGGTTCTCATTACCTGCCCCATCTCTTCCTCATAATCGTCATTGGGCACCGTGCCATGCTGTTGTTGCAACACCTTTGCTCGTAGCATTTGAATTACTTCTTTGTATATACCTCGAGAGCCTATCCGTTTATGGTTTTACTGCCGTGAATTTGAAGATTGTCTTTCTACCGTTGCTGGCATTTGAAATCATTATTTTAATAGATAATTTCAGAATGTGTAGGTCACTAATGCCCGGTGACGATGAGAGCATGAGTGATGAGGCAATATGGGAGACTCTTCCTCACTTTTGGGTTGCCATTTCAATGGTCTTCTTTGTTGCTGCTACAATATTTACTCTACTGAAGCTAAGTGGAAATGTTGGTGCTCTTGGCTGGTGGGACTTGTTTATTAATTTTGGCATTGCCGAGTGCTTTGCCTTTCTTGTCTGTACAAAGTGGTCTAATCCTGCGATTCATAGAAATATTCAAACAAGAGAAAGTTGTTCATCATCAGCAGTAGTTAGATATCTAGATTGGAACAGTGGTCTAATAGTTTATCCAGAGCAGGATCAGCATCAGGACAGAATGTGTGGCCTTCAAGACATTGGAGGCCATATCATGAAAATTCCCATAATTGTTTTCCAAATCCTACTCTGCATGTATTTAGAGGGAACGCCTGCGGGTGCGAAAAATATTCCACTCCCCGTTCTTTTCTCGCCCCTTTTTATACTGCAAGGTGCTGCTGTTATTTATGCTGCATCTAGGTTGTTGGAGAAAGTCGTACTTCTCTTACGAAGTGGATCTAGCACAGCATTGTATTTCAGTTTTTCTGCTAGGGCTCATGCTTGCTTGGAGTTTTTTCATCATGGTTCAAGGTTATTGGGGTGGTGGTCAATTGATGAAGGCAGTAGAGAAGAGCAGGCACGATTATACCATGAAGGTGCCTCTGGGTACAATACTTTTAGTGGATATCCTCCTGAGATTGTGAAGAAGATGCCCAAGAAAGATCTTGCTGAGGAGGTAAATGAGTTTTCGATGACCTTGTCTGTCGATGCTGCTGCTAGTTTTATTTGGCCTGTATTTGATCTTATGAGTCATACAGCATTTCATTATTGCTGGTTATTCAGTTGTTCTTGGGATCATATTCTATCTTCCCTACTGGCATATGATTATACTGAATTCATTGGTAAACCTGATGCTTTAAACAGGAAAAGGTGTTATGTCGGGTTTGTTTCGAGGGAGAAATTAGCGTGGTTCTTCTTCCGTGTAGGCATCGCGTACTATGCAGTACCTGCTGTGAGAAGTGTAAAAAGTGCCCAATATGTCGTGTCGCAATCGAAGAACGGTTACCGGTATATGATGTTTAGATCCTTAACTTATCCGAAGGCATAA 1536 42.51 MTWRRVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWAVFFPLWVFHVVVARGRFSLPAPSLPHNRHWAPCHAVVATPLLVAFELLLCIYLESLSVYGFTAVNLKIVFLPLLAFEIIILIDNFRMCRSLMPGDDESMSDEAIWETLPHFWVAISMVFFVAATIFTLLKLSGNVGALGWWDLFINFGIAECFAFLVCTKWSNPAIHRNIQTRESCSSSAVVRYLDWNSGLIVYPEQDQHQDRMCGLQDIGGHIMKIPIIVFQILLCMYLEGTPAGAKNIPLPVLFSPLFILQGAAVIYAASRLLEKVVLLLRSGSSTALYFSFSARAHACLEFFHHGSRLLGWWSIDEGSREEQARLYHEGASGYNTFSGYPPEIVKKMPKKDLAEEVNEFSMTLSVDAAASFIWPVFDLMSHTAFHYCWLFSCSWDHILSSLLAYDYTEFIGKPDALNRKRCYVGFVSREKLAWFFFRVGIAYYAVPAVRSVKSAQYVVSQSKNGYRYMMFRSLTYPKA 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3781509 3788397 - Lag0034022.1 Lac3g0494 600916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0494 511 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 397 - -
Lac3g0494 511 Pfam Transmembrane Fragile-X-F protein 28 292 IPR019396 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0494 Lac-Chr3:3781509 Lac8g1253 Lac-Chr8:27364287 1.30E-136 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0494 - - - 0.0