Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0501 ATGGATGCCCGCCGCGCCTCCCGCGTCGTCATCGATCCCAAAGTCCGGCAGGTTGGCTTCTTCACCCCCGATGCCCCACATTCTCCGGGTCGGACCCTACCCGCTCCGCCCGACTGCACAACTTCACAGCTCTCCGACTCTCCGACCAGCAATTCTCTGTCTCCGGTAATGATTCCGCCTCCACGTCATCCTTCCGACAACCTTGCCTCCCGGACGGCTGTTATGCCGGTTCCGGCATCAGCAAATAGGAGGCACCCTGAGGACCTGGTCCCTGTAGGGAGCCACAATCCCTCAGAAACGCTGCTCGGATCGTCGCCGATGGCGTCGCCTTCGAGTCGGATTGCAGGTGAAGATTTGGAGTTCTCGGAGGATTCATCGGCCTCCGTCTTGCTTCGGCGGAGTGGTTCGGGGAAGTTAGCCTCTAGCTGTCCCGGCGTCGGATTCCACATGGCGGCTAAGCCGGCGGAGAATTTGCAGACAATGCCTGCCAATAGTGTGAGGATATTAGGAACTAACAAGCCTGCTGGAGCGACAGAAAAGATGGGAGGAGCATCCGCAGAGGTCAAAGATCATCTTCCTTCAAGTTCGAAACCCTTGAAGGCAAAAACTACAAAGGCTGAAAGACGGGCTTTACAAGAGGCTCAGAGAGCTGCAAAAATTTCTGCAAAAGGTGAGGCAAATAAGTCGGGTACTGCCTCTGGAGCAACAGCTCCTGGTAAAGTTGGGAAACAGTCTTCAACAATTAAAGGTGGTCCTGCCACAGCTTCAGTTGCATCTGCTGACAATAGAGGAGGTGATCGTATTGTTGATAAAGAAAGGAAGAAAGATGCTCCTCCTCCACGTATGCAATTTGATGATAAACATCGGGTAGAAAGGGCTAAAAAGCGAGCTGTGTTTAGTCAAACCGAAGCAAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATATGAGCAGGGAACTCAACTTCCTGATCTTGTGTCAAAGTTTTTCCAACTTGATACCATTCATCCTGCCATATACAAGGTTGGTTTACAATACATGGCTGGAGATATATCTGGTGGTAATGCTCGTTGTATTGCAATGCTCCATGCATTTCAGCAAGCCATTAAAGACTACTCAACTCCACCACAGAAATCTCTCGTCAGAGATTTAACTGCAAAAATTGGTGTCTATGTGTCATTCTTTAATGAATGCAGGCCACTGTCTGTTAGCATGGGTAATGCAATCAGATTTTTGAAAAATCGCATTGCCAAGTTACCACCAAGTCTTCTAGAATCTGAGGCAAAAGCTACACTTTGCTTAGATATCAGTCGTTTTATCAATGAAAAGATATTGCTTGCTGACGAGGTCATAGTTAGACACGCTGCTACCAAGATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGTTGTAGAGATGCTTCTATCATATGCCCATGATCTTGGGAAACAATTTCGTGTTGTGGTGGTAGATTCTCGTCCAAAACTTGAGGGCCAAGCATTGCTTCGTAGGCTGATAGCAAAGGGCCTAAGTTGTACTTACACTCATATAAACGCTATTTCCTATGTGATGCGTGAAGTAAACCGAGTCTTTCTGGGTGCTGCTGCTGTATTAGCTAATGGAACTGTATATTCAAGAGTGGGGACTGCAGGTATAGCCATGGTTGCGCATGCATTCCATGTTCCAGTATTATTTTGCTGTGAAGCATATAAATTTCATGAAAGGGTACAACTTGATTCAATATGCTTTAATGAATTAGGTGACCCAGATGCTATCTCAAAGGTTTCAGGAAGGACTGACATTAATTATCTAGATAGTTTGACTTCTAAAGAGCATTTGCAACTTCTAAATTTAATGTATGATGCCACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGATCCCGCCAACAAGCGTGCCCGTGATCGTACGTGAGTATCGGAGAGAGCACCTATGGGTATAA 1986 46.48 MDARRASRVVIDPKVRQVGFFTPDAPHSPGRTLPAPPDCTTSQLSDSPTSNSLSPVMIPPPRHPSDNLASRTAVMPVPASANRRHPEDLVPVGSHNPSETLLGSSPMASPSSRIAGEDLEFSEDSSASVLLRRSGSGKLASSCPGVGFHMAAKPAENLQTMPANSVRILGTNKPAGATEKMGGASAEVKDHLPSSSKPLKAKTTKAERRALQEAQRAAKISAKGEANKSGTASGATAPGKVGKQSSTIKGGPATASVASADNRGGDRIVDKERKKDAPPPRMQFDDKHRVERAKKRAVFSQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDISGGNARCIAMLHAFQQAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIAKLPPSLLESEAKATLCLDISRFINEKILLADEVIVRHAATKIRDGDVLLTYGSSCVVEMLLSYAHDLGKQFRVVVVDSRPKLEGQALLRRLIAKGLSCTYTHINAISYVMREVNRVFLGAAAVLANGTVYSRVGTAGIAMVAHAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKVSGRTDINYLDSLTSKEHLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3853152 3859540 + Lag0034029.1 Lac3g0501 600923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0501 661 Pfam Initiation factor 2 subunit family 352 644 IPR000649 GO:0044237(InterPro)
Lac3g0501 661 Gene3D - 448 654 IPR042529 -
Lac3g0501 661 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 46 658 - -
Lac3g0501 661 MobiDBLite consensus disorder prediction 97 111 - -
Lac3g0501 661 SUPERFAMILY NagB/RpiA/CoA transferase-like 307 654 IPR037171 -
Lac3g0501 661 MobiDBLite consensus disorder prediction 35 53 - -
Lac3g0501 661 MobiDBLite consensus disorder prediction 171 292 - -
Lac3g0501 661 MobiDBLite consensus disorder prediction 193 214 - -
Lac3g0501 661 MobiDBLite consensus disorder prediction 1 121 - -
Lac3g0501 661 MobiDBLite consensus disorder prediction 264 292 - -
Lac3g0501 661 MobiDBLite consensus disorder prediction 226 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0501 Lac-Chr3:3853152 Lac3g0503 Lac-Chr3:3866385 3.10E-300 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0501 K03680 - csv:101215104 997.653