Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0503 ATGGATGCTCGCCGAGGCTCCCGCATCGTCAACCCCAAAGTTCGTCAGGTCGGCTTCTTCACTCTCGACGCTCCTAATCCCCCCGGCCGCTCCCTCTCCGTTCCGCCCGACTGTCTCCCTTCTCAACAATCCCTCTCTCCTCCCACCAATTCCTTGTCTCCAGTCATGATTCCCCCTCCCCGTCATCTCTCCGATAACCTTGCCTCTCGCTCTGCTGTTCTTCCGGTTCCCGCTCCCGCCAATTGGAGGAATTCCGCCGATCAGATTCCTGTTGGCAGCTATAACCCTTCCGAGACCCTCCTTGCCACCTCCCCTGTGGCCTCGCCTTCCAGTAGAGCTGGGGACGAAGAGCTCGAGATGTCGGAGGACTCTTCCACCTCCGTTTGGTATCGCCGGAGCGGTTCCGGGAAGATTGCGTCCAGCTTTCCTGGCGTTGGAATCCACGTGGCGGCTAAGGCGTCGGAGAATTCGCAAGCGGTGCCTCTTAGGACGTTGGAACCTAATAAGCCTGCTGGTGTTGCAGAAAAGAATGGAGGGGCATCCACAGAGGTGAATCAACAACCACCATCAAGTTCGAAACCCCTGAAGGCAAAAACAACAAAGGCTGAAAGACGGGCTCTGCAAGAGGCACAACGAGCTGCAAAAGTTTCTGCAAAAGGTGAGGGGATTAAGTCAGGTACTGCTCCTGGTAAAGCTGTGAAGCAGCCTTCGGCTATGAAAGACAGCACTGCAACACCTTCGGTTGCATCTATTGACAAAAGGGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCTCGAATGCAGTTTGATGATAAAAATAGAGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCGAAGTTTTTCCAACATGACACCATTCATCCTGCCATTTACCAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGTTGTATCGCAATGCTTCATGCATTTCAACAGGCAATCAAAGACTACTCAACTCCGCCACAGAAGTCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGCCTATGTTTCATTCTTTAATGAGTGCAGGCCATTGTCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCGCATTGCCAAATTACCATTGAATCTTCCGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATCAATCGCTTTATCAATGAGAAGATTATAATTGCAGATGAAGTCATAGTTAGACATGCTGCTACCAAAATCAGGGATGGCGATGTTCTTCTCACATATGGATCGTCATGTGCTGTAGAGATGCTTCTATTATATGCTCACGAGCTTGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGACCAAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTCATAGCAAGGGGCCTAAGTTGTACCTACACTCATATAAATGCTATTTCTTATGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTATCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTTCCAGTCTTAATCTGCTGTGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGGTGACCCAGATGCTATCTCAAAGGTCCCAGGAAGGAAGGATATTAATTATTTAGATGATTTTACTGCTAAAGAACAACTACAACTTCTAAATTTAATGTATGACGCTACACCCTCAGATTACATCTCAATGATCGTCACAGATTATGGCATGATCCCACCTACAAGCGTGCCGGTGATCGTACGTGAGTATCGGAGAGAGCACCTGTGGATATAA 1959 46.91 MDARRGSRIVNPKVRQVGFFTLDAPNPPGRSLSVPPDCLPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVLPVPAPANWRNSADQIPVGSYNPSETLLATSPVASPSSRAGDEELEMSEDSSTSVWYRRSGSGKIASSFPGVGIHVAAKASENSQAVPLRTLEPNKPAGVAEKNGGASTEVNQQPPSSSKPLKAKTTKAERRALQEAQRAAKVSAKGEGIKSGTAPGKAVKQPSAMKDSTATPSVASIDKRGGDRTLDKERKKDAPPPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQHDTIHPAIYQVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGAYVSFFNECRPLSVSMGNAIRFLKNRIAKLPLNLPESEVKATLCSDINRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIARGLSCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPGRKDINYLDDFTAKEQLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWI 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3866385 3871882 + Lag0034031.1 Lac3g0503 600925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0503 652 MobiDBLite consensus disorder prediction 154 275 - -
Lac3g0503 652 MobiDBLite consensus disorder prediction 254 275 - -
Lac3g0503 652 MobiDBLite consensus disorder prediction 179 196 - -
Lac3g0503 652 Gene3D - 438 645 IPR042529 -
Lac3g0503 652 MobiDBLite consensus disorder prediction 22 62 - -
Lac3g0503 652 MobiDBLite consensus disorder prediction 101 126 - -
Lac3g0503 652 SUPERFAMILY NagB/RpiA/CoA transferase-like 298 645 IPR037171 -
Lac3g0503 652 Pfam Initiation factor 2 subunit family 345 635 IPR000649 GO:0044237(InterPro)
Lac3g0503 652 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 46 649 - -
Lac3g0503 652 MobiDBLite consensus disorder prediction 36 51 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0501 Lac-Chr3:3853152 Lac3g0503 Lac-Chr3:3866385 3.10E-300 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0503 K03680 - csv:101215104 1177.54