Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac3g0591 | ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATCTCCGAGAGAGTCTATGTGTTTGATTGTTGCTTCTCCTCGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGCCACTTTCCTGATGCTTCTTTCATGGTTTTCAACTTCAGAGAAGGTGGTAGGCGAAGTCAAATTTCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTATTGCCATTGGAGATGATTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCGCTGGAGGGTCAACAGAATGTGCTATTGATGCATTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTGTTGTACAGGAAACAATACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTTCTTTAAACCCTCAGCCTTCCCAGCTGAGATATCTTCAACACATTTCCAGGAGAAATTTAGGTTCTGATTGGCCTCCATCAGATACACCTCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCCCTTTTTGATGGGGGAAAAGGATGTAGGCCTGTTGTGCGTGTTTATGGTCAAGACCCCTCTACACCGGCCAATAGAACTTCAAAGCTTTTATTTTCAACATCAATCAAGAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTTCAAGGGGACGTGGTTCTTGAATGTGTCCATTTGGATGAAGATCTGGTACGTGAGGAGATGATGTTTAGAGTTATGTTTCACACTGCATTTGTTAGATCAAACATTATGGTGCTGACCCGTGATGAAGTTGATGTCTTATGGGATGCGAGGGACCAGTTTCCTAAGGACTTCAAAGTTGAGGCACTCTTTTTGGATGCTGATGCTGTTGTCCCCAATCTCACCACAGCCTTCGATGATGAAGATGCAAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTATGAGGTTGAAGAGATCTTCAGTAATGCAATGGATGGGCAGGAAGCAAAGGGGTCCAATGATCCTCAGGTGGTCAATCATGTAGACCGTAAAGAAGATTGGAAGGAGGACTTGGATCCTCCTGCATTTCAAGATTGTGCATCTGACGATGGAAATCTTAAGCATGATAAGAAATCAAATTTTGATGCAGTGAAGGACATTACAGTGGATGATGTGAAGTATAAACTGAATGAAAAAATATATTCTGATCTTAATGCAGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCGAATTCCTTCTTGGTTGATGCTAATGTCCTGACTCATGTGAAAGCCCAGGGATTGGTAGATGATGCATACGAGAAATTTGAAGATACGGAAGAAAAGGATGATGGAAGAGATACTGCACCAGAGAAATTGGAGAACAAGGTTTTGCAGAAAAAGTTGAGTGCTGATGGTTCTAGACAAAAATTTGAAAAATTGCAAGCACCAATCCCTAAGAAACAGCCTATTTCAAGTGGAAAGCCGACCCTTGATATGGGTTTAGCCAAACAGAAAGTCAAACCGCAAGAGACTCAAGGTTTTTCTGCAAAACAAGCAAAGCCGAATGCAGTTTCTAGGTGGATCCCTCCTAACAAAGGCTCTTATACGAATTCTATGCACGTTTCTTATCCACCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCAAGTATTGCACCATCAAAGGATACAAATGCAAATTCCAAAACAAAGGCTGCTGCCACCCTTTCTTCTCTGGTTGCTACAGATGTTTTTAATGAACGAAAAAATTATAAAGTGGATTCTGTAAGGTCTTCATACTCTGCACCTGGGGAACTCATGATTGGCCCACCATCTCCCGTTCAGTCAATTGAGGAGGCATATTCTTCCTCTGAAACTTTAAAACCACCGCATAGTGATGCACAGCTTGAAGTACCACCTCCCCCCCTGCCCACAAAGCCTCCATCTCCACATTTACCGTCACCCCCCGGGGCAAATGCAATACCTCCTCCACCTCCTCCACCACCCCTTTCATTTCATCATACGGATCCAACATACTCTGCTCCACCACTTTCTGTGTCTGCAGCACCACCACCCACAGTTAACTCATCAAAGGCAGTGACTCCCCCTCCCCCTCCCCCTTCCCTTCCCCCTCCCCCTCCCCCTCCCCTTCCAGTCAGTAGGCAGAATAGCGAGAGGCTTTTGCCCCATTCTTCTACACAACCATCATGGGAGCAAATATATTCTTCTGTTTCTACTGTAATGGTGGCTGGTTCTATACCTCCTCCACCCCCACCACCCCCACCTCCACCTCCTTCTGGCCGGCCATCTACATTAAAGAATATTGGAAGTACTCCTCCCGTACCTGTTTTTTCTCCTCCTTCAGCCCTTCTTGCCTTGTCACATAAAAGTATATCACTAGCACCACCCCCACCCCCACTTCCCCCATCATCTGTGATGCATGAAGCACGTGTTCCACCACCTCCGCCACCCCCGCCTACTTCAATATATGGTGGTAGAGCTCCACCACCCCCACCCTCACCCCCATCCCCATTAGTGGATGGGGCATTTCCTTCACCATCTTTAGTGAAAGGAGCACCACCTCCACCACCTCCGCCTCCACCCATTCAATCTCCAACACCATCTTTATTACATGGAACACCACCCCCACCCCCTCCACCACCTTCAAAGCATGGAGCCCCACCTCCACCACCTTCGCCACTTCCCCCATCTTTGCATGTCCCACCTCCACCCCCTCCACCACCTCCCATGTATGGAGCACCCCCTCCTCCACCCCCTCCGATGTATGGTACACCATCTCCTTCAATCCATTCAATGCAGGGGGTACCCCCTCCACCTCCTCCACCCCCTCCAATGCCTAGTGCACCCTCTCATTTGATACGTGGTGGGCCACCACCTCCTCCACCCCCTCCAATGCGTGGGGCTTCTCCACCTCCGCCACCTCCACCACCTCCACCAATGCATGGGTCTACTCCTCCACCACCACCACCACCAATGTATGGGGCTTCACCACCACCACCACCACCACCAATGTATGGGGCTTCACCACCACCACCAATGTATGGGGCTCCACCACCACCACCACCACCTTCTTTGTATGGGGCTCCTCCGCCACCACCACCTCCATTGCATGGGGCTCCTCCACCACCTCCACCTCCCCCCATGCATGGGGCTCCTCCACCACCGCCACCTCCACCCATGCATGGGGCTCCTCCAGCACCGCCACCTCCGCCGATGCATGGGGCTCCTCCACCACCGCCACCTCCGCCGATGCATGGGGCTCCTCCTCCACCGCCACCTCCGCCAATGCATGGGGCTCCCCCACCGCCACCTCCACCCATGCATGGGGCTCCTCCCCCACCGCCACCTCCAGCAATGCATGGAGCTCCTCCTCCACCACCACCACCGTTTTTGGGAGCCCCCCCACCACCTCCCCCACCCGGGGGTGGTGGAGCCCCTCCCCCACCTCCCCCACCTGGGGGTGGTAGAGGCCCACCACCGCCTCCCCCTCCTGGGGGTGGTAGAGCGCCACCCCCACCTCCCCCACCCGGGGGTGGTGGAGCCCCGGCACCCCCTCCTCCTCCTGGAGGTCGTGTTCCCGCCCCTCCTGGAGGTCCAGGTGGTGGACCTCCTCCACCTCCACCACTAGGTGCAAAAGGAGCAAACGCTGCACCTGATCCAAGAGGTTTGTCTGCTGGAAGAGGACGTGGGCTATCACGCTCATCTACTACAGCACCTCGAAGGTCCTCCTTGAAGCCTCTACATTGGAGCAAAGTAACGAGGGCTCTACAAGGGAGCTTGTGGGAAGAGCTGCAGAGATATGGAGAGCCTCAAATTGCACCAGAGTTTGATGTGTCCGAGATAGAGACTCTCTTTTCTGCAACTGTTCCCAAACCTGCTGATAAATCTGGAGGGCGAAGGAAGTCTGTTGGATCCAAAACTGACAAAGTTCACCTGATTGACCTCAGGAGAGCGAATAACACTGAAATTATGCTCACCAAAGTAAAGATGCCACTTCCTGATATGATGGCTGCAGTGCTAGCAATGGACGAGTCAGTATTAGATGTTGATCAGGTGGAAAATCTCATAAAGTTTTGTCCTACAAAGGAGGAGATGGAACTTCTTAAGGGATTCACTGGTGACAAGGATAGCCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTAGAGTCGAAGATGAGAGTGTTCTCTTTTAAGATTCAGTTCGGCTCTCAGATATCAGAATTTAAGAAGAGCTTAAATACTGTTAACTCCGCATGTGATGAGGTGAGGAATTCTGCTAAACTGAAGGACATTATGAAGAAAATTCTTTATTTGGGGAATACACTGAATCAAGGAACAGCGAGGGGTTCTGCCGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGACACACGTGCTTCTAATAATAAGATGACGCTAATGCATTATCTTTGCAAGGTCCTCGCTTCGAAGACACCCGCTCTTCTTAATTTTCATTTGGACCTGGGTAGCTTAGAGGCAGCAACCAAGATTCAATTGAAGTCTTTAGCAGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAAGCAGGAGCTTGTTGCTTCTGAAAGTGATGGCCCAGTCTCTGAAATTTTTCGCAAGACGCTGAAAGAATTCATTGCTAGTGCTGAGACAGAGGTGGGATCAGTGACAAATCTATACTCTGTTGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGACCCGGCTCGTTGTCCATTTGAGCAGGTTACAGTGACATTATTGAACTTTGTGAGATTGTTTCGGAAAGCACATGAAGAGAACTGCAAACAGGCCGAATTGGAAAAGAAAAAAGCTGATAAGGACGCTGAAATGGAGAATGCCAAAGGAATTAGCCTTACGAAGAAGAGTGTGAAATAG | 5103 | 49.13 | MALFRRFFYRKPPDRLLEISERVYVFDCCFSSEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFREGGRRSQISDVLTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSSLNPQPSQLRYLQHISRRNLGSDWPPSDTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSTPANRTSKLLFSTSIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECVHLDEDLVREEMMFRVMFHTAFVRSNIMVLTRDEVDVLWDARDQFPKDFKVEALFLDADAVVPNLTTAFDDEDANETGAASPEEFYEVEEIFSNAMDGQEAKGSNDPQVVNHVDRKEDWKEDLDPPAFQDCASDDGNLKHDKKSNFDAVKDITVDDVKYKLNEKIYSDLNAVKDIAVDDGDMNSNSFLVDANVLTHVKAQGLVDDAYEKFEDTEEKDDGRDTAPEKLENKVLQKKLSADGSRQKFEKLQAPIPKKQPISSGKPTLDMGLAKQKVKPQETQGFSAKQAKPNAVSRWIPPNKGSYTNSMHVSYPPSRYNSAPAALASIAPSKDTNANSKTKAAATLSSLVATDVFNERKNYKVDSVRSSYSAPGELMIGPPSPVQSIEEAYSSSETLKPPHSDAQLEVPPPPLPTKPPSPHLPSPPGANAIPPPPPPPPLSFHHTDPTYSAPPLSVSAAPPPTVNSSKAVTPPPPPPSLPPPPPPPLPVSRQNSERLLPHSSTQPSWEQIYSSVSTVMVAGSIPPPPPPPPPPPPSGRPSTLKNIGSTPPVPVFSPPSALLALSHKSISLAPPPPPLPPSSVMHEARVPPPPPPPPTSIYGGRAPPPPPSPPSPLVDGAFPSPSLVKGAPPPPPPPPPIQSPTPSLLHGTPPPPPPPPSKHGAPPPPPSPLPPSLHVPPPPPPPPPMYGAPPPPPPPMYGTPSPSIHSMQGVPPPPPPPPPMPSAPSHLIRGGPPPPPPPPMRGASPPPPPPPPPPMHGSTPPPPPPPMYGASPPPPPPPMYGASPPPPMYGAPPPPPPPSLYGAPPPPPPPLHGAPPPPPPPPMHGAPPPPPPPPMHGAPPAPPPPPMHGAPPPPPPPPMHGAPPPPPPPPMHGAPPPPPPPMHGAPPPPPPPAMHGAPPPPPPPFLGAPPPPPPPGGGGAPPPPPPPGGGRGPPPPPPPGGGRAPPPPPPPGGGGAPAPPPPPGGRVPAPPGGPGGGPPPPPPLGAKGANAAPDPRGLSAGRGRGLSRSSTTAPRRSSLKPLHWSKVTRALQGSLWEELQRYGEPQIAPEFDVSEIETLFSATVPKPADKSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGFTGDKDSLGKCEQYFLELMKVPRVESKMRVFSFKIQFGSQISEFKKSLNTVNSACDEVRNSAKLKDIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVKQELVASESDGPVSEIFRKTLKEFIASAETEVGSVTNLYSVVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENCKQAELEKKKADKDAEMENAKGISLTKKSVK | 1700 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 4581722 | 4596869 | + | Lag0034119.1 | Lac3g0591 | 601013 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac3g0591 | 1700 | FunFam | Formin-like protein | 1289 | 1674 | - | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 557 | 580 | - | - | |
| Lac3g0591 | 1700 | SMART | it6_source | 684 | 1698 | IPR015425 | - | |
| Lac3g0591 | 1700 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 204 | IPR029021 | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 904 | 1269 | - | - | |
| Lac3g0591 | 1700 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1364 | 1689 | - | - | |
| Lac3g0591 | 1700 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 13 | 186 | IPR029021 | - | |
| Lac3g0591 | 1700 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 336 | IPR035892 | - | |
| Lac3g0591 | 1700 | Coils | Coil | 1663 | 1692 | - | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 800 | 818 | - | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 492 | 523 | - | - | |
| Lac3g0591 | 1700 | Pfam | C2 domain of PTEN tumour-suppressor protein | 199 | 336 | IPR014020 | - | |
| Lac3g0591 | 1700 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1290 | 1688 | IPR015425 | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 848 | 897 | - | - | |
| Lac3g0591 | 1700 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 643 | 1302 | - | - | |
| Lac3g0591 | 1700 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 773 | 798 | - | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 1675 | 1690 | - | - | |
| Lac3g0591 | 1700 | Pfam | Formin Homology 2 Domain | 1293 | 1662 | IPR015425 | - | |
| Lac3g0591 | 1700 | PANTHER | FORMIN-J | 1190 | 1687 | IPR051144 | - | |
| Lac3g0591 | 1700 | Coils | Coil | 1569 | 1593 | - | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 683 | 722 | - | - | |
| Lac3g0591 | 1700 | Gene3D | - | 205 | 336 | - | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 1675 | 1700 | - | - | |
| Lac3g0591 | 1700 | Gene3D | Formin, FH2 domain | 1288 | 1674 | IPR042201 | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 665 | 679 | - | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 1285 | 1299 | - | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 745 | 769 | - | - | |
| Lac3g0591 | 1700 | MobiDBLite | consensus disorder prediction | 492 | 525 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac10g0107 | Lac-Chr10:817923 | Lac3g0591 | Lac-Chr3:4581722 | 6.90E-26 | dispersed | |
| Lac2g0546 | Lac-Chr2:4064488 | Lac3g0591 | Lac-Chr3:4581722 | 3.20E-246 | dispersed | |
| Lac3g0209 | Lac-Chr3:1483722 | Lac3g0591 | Lac-Chr3:4581722 | 3.80E-225 | dispersed | |
| Lac3g0591 | Lac-Chr3:4581722 | Lac9g2080 | Lac-Chr9:40406557 | 1.90E-27 | dispersed | |
| Lac10g0118 | Lac-Chr10:895096 | Lac3g0591 | Lac-Chr3:4581722 | 0.00E+00 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac3g0591 | K28090 | - | csv:101215105 | 1264.21 |