Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac3g0633 | ATGGAGGCTGAAGCTCTGCCAACCAAAGATGATAGAGTTCAACCAAACGGAGGAGATCATGAAGAAGCTGCTGCCAAACAAGATGTTCTTCACAAGGTGACTTTTATGGCTGACTTGGAAAAGCCCTCCATGGAACCCCTCTCAGTCGCATCAGCTTCTTCAACTTGGAAGGAAGAGGATGATCATCAACATGAACAGAGAATCAAAATGGCGAAAGTTGAAATGAGCCAAGATTACGAGAGCCTGAAAAGGCAGTTCCATGACATAACAACTCAAAGAGAAGGTAAAAAATCGACACAAACAAGTGCGAGTACCATTAACAATGACGAGGTTGAAGAAGTGGACGACATGGTTTCACTCACATTGGGAAGATTCTCAAGCTGCGATAATCAAAACAAGAACACTTCTTCTTCAGAAAGAAAATTGGATCATAAACTGTTGGAGCTGAAAACCCCATCAAATAATGATCATATTCAAAGCCCAACTGATAGTGAAGCTAAAGATCAGGAAGAAGCCGGAGAGACTTGGCCGCCGAGTAAGGCGTTGAAGGGTTTGCCAGCTCCGGCGACCGGAGAAGATGAAGTCTCTCAGCAGAATCCTCCCAAGAAAGCTAGGGTTTGTGTGAGAGCTCGGTGTGATACCCCAACGATGAATGATGGATGTCAATGGAGGAAATATGGACAGAAGATTGCAAAGGGAAATCCTTGCCCTAGAGCTTATTATCGTTGCACTGGTGCACCTTCATGTCCAGTTAGGAAACAGGTGCAAAGGAGTGTTGATGATATTTCCATACTAATCACCACCTATGAAGGAACTCACAACCACCCTCTTCCTGTTTCAGCCATGGCCATGGCTTCCACGACCTCGGCCGCTGCCTCGATGCTCCTCTCGGGCCCTTCCTCCTCCTCCACCTCTCGGCCCGGACTTAACCCTTCGTCGTCGATCGCCACCGCGGCAAACCTCCATGGAATGAACTTGTACCTCTCCAACAACACCAATAACCCAAAGCAATTCTACTTGCCAAACTCTTCAATGCTATCTTCTTCTCTAAACCACCCCACAATCACTTTAGACCTCACTTCAAACCCTCCCTCAACTTCCTCCTCCTCCTCTCCTTTCCAATATAAAATCCCTTCAACTTATCCCCCAAAATATCCCTTCACCAGCCTTGATTTTGGCTCTTCTCAACCCAACAACTTCATGTCTAATTGGAACAATAATAATAACAACCAACCTTATAATAATATCACAAAAAATGCAATAGGAATAGCAACATCAGACCTTTCCAAACAGCTCCCTCTCCATAGCAACATCTATCAAGCCTGCCTTCAACAATTTGCCAAACCTTCAACTCCTCCGCTCCCACTCCCGCCGCCGCCGCCTCTGCCCGACACAATAGCGGCAGCAACCAAGGCAATTACGTCGGACCCGAGCTTCCAATCGGCATTGGCGGCTGCCCTAAGCTCGATCATCGGCGGCGAGGGAATTCAGCCTGTGTCTAATGTGTGTGGATCAAGTATGGGGTTTCAGGCTCCTCCATCATTGATATGCTCCAGCTCCAAGAGTCCTTCTTCATCTCCTGGTGATAGTAGAGACAATAATACAAAATGA | 1611 | 46.8 | MEAEALPTKDDRVQPNGGDHEEAAAKQDVLHKVTFMADLEKPSMEPLSVASASSTWKEEDDHQHEQRIKMAKVEMSQDYESLKRQFHDITTQREGKKSTQTSASTINNDEVEEVDDMVSLTLGRFSSCDNQNKNTSSSERKLDHKLLELKTPSNNDHIQSPTDSEAKDQEEAGETWPPSKALKGLPAPATGEDEVSQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPSCPVRKQVQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGPSSSSTSRPGLNPSSSIATAANLHGMNLYLSNNTNNPKQFYLPNSSMLSSSLNHPTITLDLTSNPPSTSSSSSPFQYKIPSTYPPKYPFTSLDFGSSQPNNFMSNWNNNNNNQPYNNITKNAIGIATSDLSKQLPLHSNIYQACLQQFAKPSTPPLPLPPPPPLPDTIAAATKAITSDPSFQSALAAALSSIIGGEGIQPVSNVCGSSMGFQAPPSLICSSSKSPSSSPGDSRDNNTK | 536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4903828 | 4907954 | - | Lag0034161.1 | Lac3g0633 | 601055 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac3g0633 | 536 | SMART | WRKY_cls | 217 | 277 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac3g0633 | 536 | FunFam | probable WRKY transcription factor 31 | 202 | 279 | - | - | |
Lac3g0633 | 536 | Pfam | WRKY DNA -binding domain | 218 | 276 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac3g0633 | 536 | SUPERFAMILY | WRKY DNA-binding domain | 210 | 278 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac3g0633 | 536 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Lac3g0633 | 536 | MobiDBLite | consensus disorder prediction | 295 | 314 | - | - | |
Lac3g0633 | 536 | ProSiteProfiles | WRKY domain profile. | 212 | 278 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac3g0633 | 536 | MobiDBLite | consensus disorder prediction | 44 | 67 | - | - | |
Lac3g0633 | 536 | Gene3D | WRKY domain | 202 | 279 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac3g0633 | 536 | MobiDBLite | consensus disorder prediction | 136 | 151 | - | - | |
Lac3g0633 | 536 | MobiDBLite | consensus disorder prediction | 86 | 204 | - | - | |
Lac3g0633 | 536 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 63 | 494 | IPR044810 | GO:0003700(InterPro) | |
Lac3g0633 | 536 | MobiDBLite | consensus disorder prediction | 514 | 536 | - | - | |
Lac3g0633 | 536 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g0572 | Lac-Chr12:6074606 | Lac3g0633 | Lac-Chr3:4903828 | 5.20E-45 | dispersed | |
Lac1g3193 | Lac-Chr1:52027363 | Lac3g0633 | Lac-Chr3:4903828 | 1.30E-42 | dispersed | |
Lac3g0633 | Lac-Chr3:4903828 | Lac6g0595 | Lac-Chr6:4971891 | 9.30E-21 | dispersed | |
Lac5g2527 | Lac-Chr5:43827611 | Lac3g0633 | Lac-Chr3:4903828 | 3.40E-46 | transposed | |
Lac10g0367 | Lac-Chr10:2868922 | Lac3g0633 | Lac-Chr3:4903828 | 1.70E-87 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
23596 | PF03106 | WRKY | 9.40E-24 | CL0274 | Lac | TF |
Pathway information
