Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0646 ATGGAAGTTTTAGGGTTTATCACCAACAAATGGATTGCAACGGCCCTCGGGATTTGGATCCAATGCATCTGCGGTGCCTCCTACACCTTCAGCATCTATTCTTCGGCTCTCAAATCCACTCAGGGCTACGATCAATCCACCCTCGACACCGTTTCCGTTTTCAAGGACATCGGCGCCAACGCCGGCGTCATTTCTGGCTTTCTCTACTCCGCCGTCACTCCCGCCTCCCGCCGATCGAGCTCCGCTGGCCCATGGGTGGTCCACGCGGCGGGAGCGGTTCAGTGCTTCCTCGGATATATTTTCATCTGGGCGGCCGTCTCCGGTGTGATCGATCGGCCGCCGGTGCCGGCGATGTGCTTCTTCATGTTTCTGGCTGCACATGCGCAAACGTTTTTCAATACCGCGAATGTGGTGACCGGCGTTCACAATTTTGCGCACTATAGCGGGACGATTGTCGGCATCATGAAGGTACCAACACAAACTCTTAGTTTTCTTGATTATACAGATTGTTGTGTTGGGACTCTGGATTTTGGCTTCGATTTTAGCTTAGATTGTTGGGGAAATTTGATTCTGGGATATCTTGGTCTTAGTGGAGCACTGCTAATCCAAGTTTATAACACGGCGTGCAATGGAGAACCAAGCAATTTTCTCCTGATGCTGGCTGTATTGCCCACACTTCTTTCCGTCATGTTCATGTGGTTTGTTAGAATTGACAAAACAGAGTCCAGAAATGAGATGAAGCATTTGAACTCATTGTCTGCGCTTGCGGTGATTGTTGCTTTTTACTTGATGGTTGTCATCATTTTGAACAACACTTTCACCCTTTCATCATGGACTCGTTTCATTACATTCTCCATACTCTTGATTCTCCTTGCTGCTCCTCTTGGAATCGCCATTAATGCTCAGAGGGAGGAGAACTTTAGAGGGTCATCTCCATCACTCTTCACTGGAGAAAGTCCTGTTCTTAACAAACCCAAGTCAGTGAATGCAGAGGATTCTGTGGAATATCACGAGTTGCCGAGTGATGAGAGCCAGAGAATGGCTGCTGCAAACTCCAAACCTCCTCAAGCCATGAATGTCTTGGAAGCTATACGCACTGTAAACTTCTGGCTTTTGTTTCTTGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACAATAAACAACATGAGCCAGCTTGGCCAATCCCTTGGCTACACAGCAACAGAGACAAAGACATTCGTTTCCTTATGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGCTACACCTCTGATTTTCTTCTCCACTCATATGGCTGGGCAAGGCCATTGTTAATGGCAATTACTCTTCTGATAATGAGTGGTGGCCACATCGTGATCGCCTCTGGTTTCTCTGGAAATCTCTATGTGGGTTCAATTCTTGTTGGCATATGCTACGGCTCACAGTGGTCACTGATGCCCACAATCACTTCAGAGATATTTGGCTTAGAGCATATGGGAACTATTTTCAACACCATAGCCATAGCCAGTCCTCTGGGGTCTTACATCTTTTCGGTTCGAGTCATCGGCTACATTTACGACCGAGAAGCCGCCGGTAAACATGGCTCCTGCTCCGGCACACACTGTTTTGTAGTATCTTTTCTGGTCATGGCCGCCGTGGCTTTCTTGGGTTTTCTTGTTGCTGCTGCTCTCTTCTTTCGAACCAGGAGATTTTACCGACTGGCTTTGCAAAGAAGAGTTGAACATAGATCGCTACAGTTGCAAGCATTTGGATCCAATGCATCTGCGGCCCATCCTACACCTTCGGCCGGAGTTCTCGCCGGCCTCCTCTACTCCGCCGTTGTCTCCACCAATCACCCGCGTCGCCCATGGATCGTCCTCATCGTCGGAGCAATCCAGTGCTTCCTCGGTTACATTTTCATATGGCCCGCCGTCTCCGGCCTAATCCCTCGGCTGCCGGTGCCGGCGATGTGCCTGTTCATGTTTCTAGCCGTCCATGCCCAAGTTTTCTTCAACACGGCCAACGTCGTCACTGGTGTCAATAACTTCCAGCTCTACGGCGGCACCATTCTCGGCATTCAAAAGGGATTTCTAGGTCTCAGTGGAGCAGTTCTGATTCAATTCTCGAACACACTCTGCAATCGAGACCCTGTAGCATTTCTTTTAATGCTTGCGATCTTGCCGGCGCTCACGACGCTTCTGCTCATGAGATTCGTCGTCATCGACAAAACAGAGACCGGAAACGAATCCAAACATTTGAACTCCTTCTCGTCAATCGCTCTGATAATCTCCGGTTATCTCACGATTCTCATCATTTTAGACAATTCCCTCACCCTTCCAACATGGGCTCGCATCTTCACCTTCGTTCTACTCCTAACCCTCATCGCTTCCCCTCTCGGAATCGCAATCAGAGCAAAAACAGAGGACTCTGTTTTCAGAACCAAGCTTGACGAATCCCTTGAATACCGTCAAATTCCCAGTGAAGAACAGACCCACGATCAGCAAGTGCTCGATTCCGATAGAGACATTGATCTAATCGAGGCCACTGGAACTTTAGACTTCTGGTCTAGATCAACACCTTGGTTTCCTTGTGGAGCATTTGGAGTTTCCTTGGCCGCCTTCAAATTTTCGAACCCAAAATTTAAGGTCCATTTGATAATCCTTTTTTTTATTTTTGAAAATTTAAGGCTGGGGAAGGCCATTGTTGATGGCCATAACTCTGCTAGCAATGAGCGTCGGCCACATCATAATTGCTTTGGGCTTCACTGGGAATTTATACGTTGGATCAGTGATGGTGGGGATTTGTTATGGAGCTCAAATCTCTCTGATGCCTGCAATTACGGCGGAGATATTTGGAATAAAGCATATGGGCACCATTTACAACGCCATCAATTGGATCTTATATTTTATCTGTTCGAATCGTTGGGTTTATATATGACAGAGAAGCCTCTTCTGAAGACAACTCCTGCTCCGGCAAACACTGTTTTATGA 2976 47.75 MEVLGFITNKWIATALGIWIQCICGASYTFSIYSSALKSTQGYDQSTLDTVSVFKDIGANAGVISGFLYSAVTPASRRSSSAGPWVVHAAGAVQCFLGYIFIWAAVSGVIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHYSGTIVGIMKVPTQTLSFLDYTDCCVGTLDFGFDFSLDCWGNLILGYLGLSGALLIQVYNTACNGEPSNFLLMLAVLPTLLSVMFMWFVRIDKTESRNEMKHLNSLSALAVIVAFYLMVVIILNNTFTLSSWTRFITFSILLILLAAPLGIAINAQREENFRGSSPSLFTGESPVLNKPKSVNAEDSVEYHELPSDESQRMAAANSKPPQAMNVLEAIRTVNFWLLFLAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMAITLLIMSGGHIVIASGFSGNLYVGSILVGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAGKHGSCSGTHCFVVSFLVMAAVAFLGFLVAAALFFRTRRFYRLALQRRVEHRSLQLQAFGSNASAAHPTPSAGVLAGLLYSAVVSTNHPRRPWIVLIVGAIQCFLGYIFIWPAVSGLIPRLPVPAMCLFMFLAVHAQVFFNTANVVTGVNNFQLYGGTILGIQKGFLGLSGAVLIQFSNTLCNRDPVAFLLMLAILPALTTLLLMRFVVIDKTETGNESKHLNSFSSIALIISGYLTILIILDNSLTLPTWARIFTFVLLLTLIASPLGIAIRAKTEDSVFRTKLDESLEYRQIPSEEQTHDQQVLDSDRDIDLIEATGTLDFWSRSTPWFPCGAFGVSLAAFKFSNPKFKVHLIILFFIFENLRLGKAIVDGHNSASNERRPHHNCFGLHWEFIRWISDGGDLLWSSNLSDACNYGGDIWNKAYGHHLQRHQLDLIFYLFESLGLYMTEKPLLKTTPAPANTVL 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5028583 5034645 + Lag0034174.1 Lac3g0646 601068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0646 991 CDD MFS_Mch1p_like 10 552 - -
Lac3g0646 991 Gene3D MFS general substrate transporter like domains 359 568 IPR036259 -
Lac3g0646 991 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 567 - GO:0016020(PANTHER)
Lac3g0646 991 Pfam Nodulin-like 10 156 IPR010658 -
Lac3g0646 991 Pfam Nodulin-like 188 298 IPR010658 -
Lac3g0646 991 Pfam Nodulin-like 607 797 IPR010658 -
Lac3g0646 991 SUPERFAMILY MFS general substrate transporter 228 565 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0646 Lac-Chr3:5028583 Lac3g0648 Lac-Chr3:5043189 2.50E-168 dispersed
Lac3g0646 Lac-Chr3:5028583 Lac3g0647 Lac-Chr3:5038413 2.90E-193 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0646 - - - 0.0