Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0647 ATGGAAGCTCCTTCTCTGAGCAACAGATGGATCGCTACAATTTCAAGCATTTGGATTCAATGCATCTGCGGCCCATCCTACACCTTCGGCATCTACTCCTCCGCCCTCAAATCAACTCAGAACTACCATCAATCCACTCTCGACACTGTCTCCGTCTTCAAAGACATCGGCGCCACCGCCGGACTTCTCGCCGGCCTCCTCTACTCCGCCGTCGTCTCCCACGATCGCCCCCGTCGCCCCTGGATCGTCCTCATCGTCGGAGCAATTCAGTGCTTCCTCGGTTACATCTTCATGTGGGCCGCCGTCTCCGGCTTAATCCCTCGGCCGCCGGTGCCGGCCATGTGCCTGTTCATGTTTTTAGCCGTCCATGCCCAAGTCTTCTTCAACACGGCCAACGTCGTCACTGGCGTCCATAACTTCCAGCTCTACGGCGGCACCATCGTCGGCATTCTAAAGGGGTTTCTGGGTCTTAGTGGAGCAGTTCTGATCCAATTCTCTAACACATTCTACGATGGAAACCCAGTAGATTACCTTCTGATGTTAGCGATCTTGCCGGCGCTTACAACCCTTTTGCTCATGAGATTTGTCGTCATCGACAAAACAGAGACCGGAAACGAATCGACCCATTTGAATTCCCTCTCCTCAATCGCTCTCATAATCTCCGGTTATCTCACGATTCTCATCGTTTTGGACAACGTCCTCACTCTACCAACATGGGCTCGCCTCTTCACTTTCATTTTACTCCTCGCCCTTCTCGCTTGTCCTCTCGGAATCGCAGTCAGAGCACAAACAGAGGACTCTGTTTTCAAGACCAAGCTTCAGAACACCGACGATTGCGTTGAATATCATCGAATTCCGAGTGAAGATCAGAGAAATGAACAGCTAACGATCGTTACAGATGGAGAAATGAACATAATCGAGGCAATGGGCACGGTGAATTTCTGGATACTGTTTTTCGCGATGATGTGCGGGATGGGTTCTGGGTTGGCCACCATAAACAACATGAATCAACTCGGACAATCTCTGGGCTACGGAACAGTGGAAATCAACACATTCGTTTCACTTTGGAGCATTTGGAATTTCCTCGGGCGGCTGGGATCTGGCTATGCCTCTGATCTTCTCCTCTGGAAATTAGGCTGGGCGAGGCCATTGTTAATGGCCATCGCCTTGCTAACGATGAGCGTCGGCCATATCATCATAGCTTCGGGATTCTCTGGGAATCTGTACTTGGGGTCGGTGATTGTGGGGATTTGTTACGGCGCTCAATGGTCGCTGATGCCGGCGATTACGGCGGAGATTTTTGGAATTAGACATATGGGTACAATTTACAACACCATCACTGTAGCCAGTCCGATTGGATCTTATGTTTTGTCTGTTAGAGTTATTGGGTATATTTACGACAGAGAAGCCTCCGCCGGAGACAACTCCTGCTCCGGCAAACACTGCTTTATGACGTCTTTTCTGATCATGGCGGCTGTGGCGTTCCTGGGTTTTGTTGTTGCTGTTGCTCTGTTCTTTCGAACCAGGAGATTCTATCAAGTTCTTGTGCAGAGACGGCTCAAAGATTAG 1569 50.22 MEAPSLSNRWIATISSIWIQCICGPSYTFGIYSSALKSTQNYHQSTLDTVSVFKDIGATAGLLAGLLYSAVVSHDRPRRPWIVLIVGAIQCFLGYIFMWAAVSGLIPRPPVPAMCLFMFLAVHAQVFFNTANVVTGVHNFQLYGGTIVGILKGFLGLSGAVLIQFSNTFYDGNPVDYLLMLAILPALTTLLLMRFVVIDKTETGNESTHLNSLSSIALIISGYLTILIVLDNVLTLPTWARLFTFILLLALLACPLGIAVRAQTEDSVFKTKLQNTDDCVEYHRIPSEDQRNEQLTIVTDGEMNIIEAMGTVNFWILFFAMMCGMGSGLATINNMNQLGQSLGYGTVEINTFVSLWSIWNFLGRLGSGYASDLLLWKLGWARPLLMAIALLTMSVGHIIIASGFSGNLYLGSVIVGICYGAQWSLMPAITAEIFGIRHMGTIYNTITVASPIGSYVLSVRVIGYIYDREASAGDNSCSGKHCFMTSFLIMAAVAFLGFVVAVALFFRTRRFYQVLVQRRLKD 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5038413 5040060 + Lag0034175.1 Lac3g0647 601069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0647 522 Gene3D MFS general substrate transporter like domains 208 505 IPR036259 -
Lac3g0647 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 312 522 IPR020846 GO:0022857(InterPro)
Lac3g0647 522 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 512 - GO:0016020(PANTHER)
Lac3g0647 522 CDD MFS_Mch1p_like 9 497 - -
Lac3g0647 522 SUPERFAMILY MFS general substrate transporter 7 197 IPR036259 -
Lac3g0647 522 Pfam Major Facilitator Superfamily 318 510 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Lac3g0647 522 Pfam Nodulin-like 9 259 IPR010658 -
Lac3g0647 522 SUPERFAMILY MFS general substrate transporter 212 510 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0647 Lac-Chr3:5038413 Lac8g0682 Lac-Chr8:12361773 2.20E-83 dispersed
Lac3g0646 Lac-Chr3:5028583 Lac3g0647 Lac-Chr3:5038413 2.90E-193 tandem
Lac3g0647 Lac-Chr3:5038413 Lac3g0648 Lac-Chr3:5043189 4.50E-169 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0647 - - - 0.0