Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0648 ATGGAGACTTCCAGCTTAAACAACAAATGGGTATCAACAGTAGCTAGCGTATGGATTCAATGCACCAGTGGGTCTCTCTACACCTTCTCAATCTACTCCCAAACCCTCAAATCGACTCAGGGATACGATCAGTCCACTTTGGATATTGTTTCTGTTTTCAAAGACATCGGTGTCAATTGCGGCGTCCTTGCCGGCTTTCTCTACTACTATGCCGCCGCTGATGGTGATCATCGTCGGCCGTGGATTGTTCACTTGGCCGGTGCAATTCAGTGCTTCTTGGGTTACTTTCTTATGTGGGCTGCCGTTGCTGGGGTCATCCCTCAGCCGCCGGTTCCCGCTATGTGTCTTTTCATGTTGGTGGCTGCTCATGCTCAGAGCTTCTTCAACACGGCTAACGTTGTCACTGGCGTTCGGAACTTCCCCAGTTATAGTGGGACGATTGTTGGAATCATGAAGGGGTTTCTTGGTTTGAGTGGAGCAATATTGATTCAAGTATACGAGACAATATTTAATGAACAACCTACTTCGTTTCTTCTGATGCTGGCACTGCTACCAAGCCTTAATTCCTTATTGTGCATGTGGTTTGTGAGAATCCACAATATAGACGATGGAAATGAAAAAGAGCATCTGAATACCTTATCCATAATTACTCTGCTCGTTGCTACTTACCTCATGCTCAAGATAGTTCTAGAGCATATTTTCACCTTCCAATTCCCTCTACATGTCGCTACATTTGTTCTACTTTTGATGTTGCTTGCATCTCCTCTATATATTGCAATTAGAGCCCAACAGAGAGAGTCCCGAAAGATTTTGCACCCTTCTTTTACTGAGAGTGACCAGCTGATTGGTCGCTCCAATCAAGAGATCATGGATTTTGACAATGAACGGAGAAGGGAATCTGAAGAAAGCCTGAACCTCTTTCAAGCTTTATACACCATAGACTTCTGGATACTGTTTTTTGCAACAGCTTGTGGCATGGGAACAGGGTTAGCTACAGTGAATAATATCAGCCAGATAGGATTATCTCTTGGTTACACAAGCTTGGAGATAAATACTTTGGTTTCCTTGTGGAGCATCTGGAACTTTTTTGGTCGTTTTGGAGCTGGATATATTTCGGATTATTTTCTGCATGCCAAAGGATGGGCTAGGCCATTATTCATGTTCATCACTCTGACAACCATGAGCATTGGACATGTAGTGATTGCCTCTGGCCTGCCTGGTGCTCTTTTTGCTGGTTCGGTAGTAGTGGGTGTTTCTTACGGGTCTCAATGGTCACTAATGCCAACAATTACTTCTGAAATATTTGGTGTTGTACACATGGGTACTATATTCAATGCCATTACAATAGCAAGCCCTGTTGGATCTTATATATTTTCTGTTAGAGTTGTTGGGTATATATATGACAAGGAAGCATCAGATGAAGGAGATACTTGTACTGGAACTTACTGCTTCATGTTGTCATTTCTGATTATGGCTTTTGCCACCCTTTTGGGCTCTTTAGCAGCCCTTGGCTTATTTTTCTGGAGAAGAAGTTTTTACAATCGAGTTGTTTTTAGAAGGCTGCAACAATCATCGAGTGGATAA 1584 42.99 METSSLNNKWVSTVASVWIQCTSGSLYTFSIYSQTLKSTQGYDQSTLDIVSVFKDIGVNCGVLAGFLYYYAAADGDHRRPWIVHLAGAIQCFLGYFLMWAAVAGVIPQPPVPAMCLFMLVAAHAQSFFNTANVVTGVRNFPSYSGTIVGIMKGFLGLSGAILIQVYETIFNEQPTSFLLMLALLPSLNSLLCMWFVRIHNIDDGNEKEHLNTLSIITLLVATYLMLKIVLEHIFTFQFPLHVATFVLLLMLLASPLYIAIRAQQRESRKILHPSFTESDQLIGRSNQEIMDFDNERRRESEESLNLFQALYTIDFWILFFATACGMGTGLATVNNISQIGLSLGYTSLEINTLVSLWSIWNFFGRFGAGYISDYFLHAKGWARPLFMFITLTTMSIGHVVIASGLPGALFAGSVVVGVSYGSQWSLMPTITSEIFGVVHMGTIFNAITIASPVGSYIFSVRVVGYIYDKEASDEGDTCTGTYCFMLSFLIMAFATLLGSLAALGLFFWRRSFYNRVVFRRLQQSSSG 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5043189 5045222 + Lag0034176.1 Lac3g0648 601070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0648 527 Gene3D MFS general substrate transporter like domains 210 508 IPR036259 -
Lac3g0648 527 Pfam Nodulin-like 9 260 IPR010658 -
Lac3g0648 527 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 514 - GO:0016020(PANTHER)
Lac3g0648 527 SUPERFAMILY MFS general substrate transporter 10 199 IPR036259 -
Lac3g0648 527 SUPERFAMILY MFS general substrate transporter 215 510 IPR036259 -
Lac3g0648 527 CDD MFS_Mch1p_like 9 494 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0646 Lac-Chr3:5028583 Lac3g0648 Lac-Chr3:5043189 2.50E-168 dispersed
Lac3g0648 Lac-Chr3:5043189 Lac8g0682 Lac-Chr8:12361773 1.90E-87 dispersed
Lac3g0647 Lac-Chr3:5038413 Lac3g0648 Lac-Chr3:5043189 4.50E-169 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0648 - - - 0.0