Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0672 ATGGCTTTCTTTCCTCCTGCCGCTTTTCTTTTTGTAATTTTGCTATCTGTTCCATTCTCTGTTGAATCGAAGCTTTCTCTTGATTATTACCAGAAGACTTGCCCTGATTTTGCAAAGATTGTTCAAGAGACCGTCGCTAAAAAGCAGGCTACTAGCCCAACCACCGCCGCCGCTACTCTGCGCCTGTTCTTCAACGATTGCTTGGTTGGAGGCTGCGATGGATCTATTCTTGTTTCGTCCAATGCCTTCAACCACGCCGAGCGCGATGCCGATATCAACCTCTCTCTTCCAGGAGACGCCTTCGACGTCGTCACTCGAGCGAAGGTCGCCTTGGAGCTCTCCTGCCCCGGGATCGTCTCTTGCTCCGACGTTCTAGCACAGGCGACTCGCGATCTCGTCACGATCGCAGGCGGACCGTCGTACAGCGTTCGATTAGGGCGAAAAGACAGCCTCGTCTCGAAATCTTCATCCGTGGAAGGCAACATTCCGAAGTCGAATCAATCAATCGACGAGATGATCAAGCTATTCACCGCGAAAGGCTTCACGATTCAAGAAATGGTAGCGCTATACGGCGAACGCACGATCGGATTCTCAAATTGCAAGGAATTCAGCGAGCGGATCTTCAATTTCAGCAAAACAACACCAACAGATCCAGAGATCCATCCTAAGTTCGCGGAGGCTTTGAAGCAGACCTGCGCCGGTTACGAGAAGAATCCGGGAATGTCGGCGTACAGCGACGCCGTGACGCCGGGAAAGTTCGACAACCTGTACTACCAGAATCTGCTGAGGGGAATGGGACTTTCGGTGTCGGATCACGCGCTGGTGAAGGATCCGAAGACGAAGAAGTTCGTGGAGATGTACGCCGGAAACCAGGCAATGTTCTTCAAGGATTTCGCACAGGCCATGGAGAAGATGAGCGTTCGTGAGGTGAAAACTGGTGGGAAAGGAGAAGTGAGGAGGAGATGCGATGTGTTCAATTCAATCCAAGCTTGA 993 51.56 MAFFPPAAFLFVILLSVPFSVESKLSLDYYQKTCPDFAKIVQETVAKKQATSPTTAAATLRLFFNDCLVGGCDGSILVSSNAFNHAERDADINLSLPGDAFDVVTRAKVALELSCPGIVSCSDVLAQATRDLVTIAGGPSYSVRLGRKDSLVSKSSSVEGNIPKSNQSIDEMIKLFTAKGFTIQEMVALYGERTIGFSNCKEFSERIFNFSKTTPTDPEIHPKFAEALKQTCAGYEKNPGMSAYSDAVTPGKFDNLYYQNLLRGMGLSVSDHALVKDPKTKKFVEMYAGNQAMFFKDFAQAMEKMSVREVKTGGKGEVRRRCDVFNSIQA 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5237884 5238876 - Lag0034200.1 Lac3g0672 601094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0672 330 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac3g0672 330 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 FunFam Peroxidase 163 305 - -
Lac3g0672 330 PANTHER - 12 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 FunFam Peroxidase 28 173 - -
Lac3g0672 330 Gene3D - 28 326 - -
Lac3g0672 330 Pfam Peroxidase 41 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac3g0672 330 Gene3D Peroxidase, domain 2 163 305 - -
Lac3g0672 330 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0672 Lac-Chr3:5237884 Lac8g0409 Lac-Chr8:5201816 1.70E-105 dispersed
Lac10g0423 Lac-Chr10:3320953 Lac3g0672 Lac-Chr3:5237884 1.20E-124 wgd
Lac3g0672 Lac-Chr3:5237884 Lac8g2616 Lac-Chr8:43756430 1.40E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0672 K00430 - csv:101213178 560.066