Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0675 ATGTTGGCCTTTTTAGTTCATTGTAATTGTAATCTTCGCCAATACCACCGCATCGTCCTGTGTCTGTATGTCTTCTTGCCTCCTATGTCGTCGCAGAAAAGAAACCCAGATGATGGAGATGGTCCGGCGGGTGGTGACAATCCCGATAATAAGCGTAGAAAGTATAGTTTTGAGAGAGTGGTTCGTGATGCACAGGCATTTCAATCAATGCAACAGCTATTGGAGCCACTCATTCGTAAAGTGGTAAGGGAGGAGGTTGAATCGGCACTTAGAAAATACATTACCAATGTGCCAAGGAATGATGAAAATGATGCAAAAGAAATCTATTCTTCTGGGCCAAGATGCTATCAATTGAAGTTCGTAACTGATATGTCTCTCCCGGTATTTACTGGAGCTCGCATTGAAGGAAGAGATGGTTCCAACTTGATGGTGGCTTTGATTGACACCCTAAATGGGGAAATTGTTGACACTGGGCCTCAGTCCTCGGCCAAAGTGGAAATTGTAGTGCTCGAGGGTGATTTTGAGGGTGGAGGTGATAATCACACTATAGAGGAGTTTAAGAATAACATTGTAAGGGAGAGGGAAGGAAAAAAACCACTTCTTACAGGAGATACATTTGTGAATCTCAAAGAGGGCATTGGTGTAGTAGGTGAGATTTCTTTCACTGATAATTCAAGCTGGACTAGAAGCCGTCGGTTCAGGCTGGGTGCAAGAATTGTAGACGACACGGATGGAACGAGAGTACTAGAAGCAAAGACTACTTCATTTGTGGTCAGGGATCACCGTGGAGAATTGTACAAGAAGCACCACCCTCCATCTTTGCAAGATGAAGTATGGAGATTGCAGAAAATTAGCAAAGAAGGAGCCTATCATAAGCGCCTGAGCCAAGAGAAAATCAAGACGGTGCAAGATTTCCTAACTCATCTTCATGTACAACCTTCAAGGCTTCGTAATATTCTTGGTGGTATGTCTACCAAAATGTGGGAAGCTATAATTGAGCATGCTCAGACATGTGTGCTCGATAAGAAGATTTACTTGTACAAACCTCATGATGTGGAACAGAAAAGCGGAGTGGTCTTTAATGTTGTAGGACAAGTGATGGGGCTACTTTCAGATTGCCAGTACGTTCCCATAGATAAGCTATCTGAAACTGAAAAGGCTGATGCTCACAACTTGGTTATCTCCGCATACAAACACTGGGAAGACGTGGACTCTATTGATGATGAAACTTCTCTTGTAGGTGGCTCCTCTACTCAGCCAGTTAGTTTTCTTTACACCCCGAGCTCACCAATGGAGGACCATTCTTATGGTAGCAAGTACTTGGGTTCTATTGGGAGTGCGAGTGGCTTTGATTTTACGCCATCAAATGCCTACTCTTCTGACATAATCTCATCAATGGGTTCTATTGGGAGTGCGAGTGGCTTGGACGATCATGCTTTGCAGGGTTTTGAATCTATGGTTGTAAGATATGATCAGATTCCAAGTTCCCTAAACTTTGCCAACTCTTTGATCTGCGATTCTGAGCCACTAAATTCATCTTTCTATGGCGTGGATCATCTGCAAGTTTTAGAACCTGATTTGCAATGTAGCTCGATTTTAGAATCACGAGCTACTCTTCAAGGTGGCTCCCCGTCATGTATTGCTCAAATTAGATGGACTAAGGTTTATGGCGTGCTAAAGTGGTACTCTTTGTGGAGATTGGTAATTAGGAGGAACAAACACGGATACGAGAGATACAACAAAGGTGCCATGGGTCGTGGAAAGGAAAAGTTGGACTACGGCTGA 1785 43.42 MLAFLVHCNCNLRQYHRIVLCLYVFLPPMSSQKRNPDDGDGPAGGDNPDNKRRKYSFERVVRDAQAFQSMQQLLEPLIRKVVREEVESALRKYITNVPRNDENDAKEIYSSGPRCYQLKFVTDMSLPVFTGARIEGRDGSNLMVALIDTLNGEIVDTGPQSSAKVEIVVLEGDFEGGGDNHTIEEFKNNIVREREGKKPLLTGDTFVNLKEGIGVVGEISFTDNSSWTRSRRFRLGARIVDDTDGTRVLEAKTTSFVVRDHRGELYKKHHPPSLQDEVWRLQKISKEGAYHKRLSQEKIKTVQDFLTHLHVQPSRLRNILGGMSTKMWEAIIEHAQTCVLDKKIYLYKPHDVEQKSGVVFNVVGQVMGLLSDCQYVPIDKLSETEKADAHNLVISAYKHWEDVDSIDDETSLVGGSSTQPVSFLYTPSSPMEDHSYGSKYLGSIGSASGFDFTPSNAYSSDIISSMGSIGSASGLDDHALQGFESMVVRYDQIPSSLNFANSLICDSEPLNSSFYGVDHLQVLEPDLQCSSILESRATLQGGSPSCIAQIRWTKVYGVLKWYSLWRLVIRRNKHGYERYNKGAMGRGKEKLDYG 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5250577 5258809 + Lag0034203.1 Lac3g0675 601097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0675 594 Pfam Calmodulin binding protein-like N-terminal domain 116 261 IPR046831 -
Lac3g0675 594 Pfam Calmodulin binding protein C-terminal domain 343 405 IPR046829 -
Lac3g0675 594 PANTHER OS02G0177800 PROTEIN 38 445 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Lac3g0675 594 MobiDBLite consensus disorder prediction 33 52 - -
Lac3g0675 594 Pfam Calmodulin binding protein central domain 274 338 IPR046830 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0301 Lac-Chr3:2147516 Lac3g0675 Lac-Chr3:5250577 5.00E-90 dispersed
Lac3g0675 Lac-Chr3:5250577 Lac6g2558 Lac-Chr6:43307423 1.60E-58 dispersed
Lac3g0675 Lac-Chr3:5250577 Lac3g2904 Lac-Chr3:46407289 9.90E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0675 - - - 0.0