Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0693 ATGCTGTCAAGTTCTTGCTTGAGTTTATTAGAGTTATCATCTGCTGATATGTTGGATTTCCCCCTTACACCAAGAACTGTTCCACGGGTGATGACGGCATCGGGAATATTTTCCGATAAGGACAGGGATTTGGAAGTTTCCCCGTCTAAATGCCGAGGGAGGAAAATAATAGTGGCGAATTTTCTTCCTCTTCATGCTAAAAAGGATCCAGATTCTGGAAAATGGAACTTCAGTTTTGATGAGGATTCGATTCTGCTTCAGCTGAAGGATGGATTCTCATCAGATGTAGAGGTTATATATGTTGGATCGTTAAAGGTTGATGTCGATACCCGAGAGCAAGATGAGATTTCTCAGAAACTACTAGAGGAATTCAACTGTGCACCGACTTTCATCCCTACGTCCCTCCAGAAACAGTTCTATCATGGATTCTGCAAACAACATTTGTGGCCACTTTTTCATTACATGATGCCAATTTCCCCTTATCATGGCTCTCGTTTTGATCGACGTCTTTGGCAAGCGTATCTTTCAGCGAACAAAAGGTTTGCTGATAAAGTTATGGAGGTAATCAATCTGGAAGAAGACTATGTCTGGGTTCATGACTACCATCTTATGGTTCTCCCTACTTTTTTGAGAAAACGTTACAGTCGAATTAAGCTTGGATTTTTCCTTCATAGTCTGTTTCCCTCATCAGAAATCTACCGAACTCTGCCCGTCAGAGATGAGATTCTAAAAGCATTACTAAATGCAGACATAATTGGTTTCCATACATTCGATTATGCTCGCCACTTCCTATCTTGTTGTAGTAGACTGCTTGGTCTGGAGTATGAATCTAAACGAGGCTATCTCACGCTTGAGTATTTTGGCCGTACAATATACATCAAGATCTTGCCTGTTGGAGTTCATATGGGTCGTCTTGAATTTGCATTAAATCAACCCCACACTTCAATCAAGGCCAAGGAGATCAAAGAAAATCTCAAAGGAAAGAAGCTTATTCTCGGTGTTGATGATATGGACATATTTAAAGGTATTGGTCTGAAGTTGTTGGCAATGGAACAGCTCTTGAACCAGCATCCGGAGTTACAGGGCAATGTCGTTCTGGTGCAAATTCTACATCCAGCACGGAGCAATGGGAATGATGTCCTGGAAGCAAAAAGGGAAACTTATGAGATAACCAAAAGGATTAACGAGACTTTCGGTTTTCCGGGATATGAACCTGTAATCTTGATTGATCATCCTATTCCTCCTCATGAGAAGATTGCATATTATGTATCAGCAGAGTGCTGTATTGTAAATGCTCTCAGGGATGGTATGAACTTAGTTCCTTATGAATACATTGTTTGTCGACAGGGAACTTCACAAATGGATGAAGTCTTGGAAGTCTCCCCAAATTCACCTCGTACCAGCACGCTTGTCGTGTCGGAATTTATAGGTTGTTCACCATCTCTAAGTGGTGCGATCAGGGTAAACCCCTGGGATTTTGATGCTGTAGCTGATGCACTTTATGTGGCTGTCACAATGCCTGCTTTGGAGAAGCAACTGAGGCACGAAAAGCATTACCGATATGTTAGCTCTCACAATGTTGCTTACTGGGCTCGCAGTTTCTCGCAAGATTTGGAGCGAGCATGCCGAGAACACTACAGTAAACGTTGCTGGGGCATTGGACTTGGTTTAAGCTTCAGAATTTTGTCACTTTCTCCAAGTTTCAGGAAGCTTTCCATTGAACATATTGGCTCTGCATATAGGAGCGCTTCTAGGAGGGCCATATTTTTGGATTATGACGGGACTGTGGTTTCCCAAGCTTCATTGGTCAAAACCCCATCACCTGAAGTCATTTCTATCCTCAACAACCTTTGCACAGATTCAAACAACACCGTGTTTATAGTTAGTGGCAGGGGGAAAGATTCTCTCGGTTCTTGGTTCGATTCGTGTAAGAATCTCGGAATTGCTGCTGAACATGGATACTACTTGAGGTGGAATAGAGACTCGGAGTGGGAAGTCAGTACATTAGCTGAAAACTTTGGTTGGAAAAGTATTGCAGAACCTGTGATGCAACTATATACCGAGGCAACCGATGGCTCATCCATAGAGCCTAAGGACAGTGCCTTGGTATGGCACCATCAAGACGCCGATCCTTATTTCGGTTCATGCCAGGCCATGGAGCTCTTAGATCACCTTGAAAATGTTCTTGCTAATGAACCCGTAGTCGTCAAAAGAGGCCAGCAGATCGTCGAAGTGAAACCACAGGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTTCCACAATGATAAGCTCTGATAAAGCACCCGACTTCGTGATGTGCATTGGAGACGATCGATCCGACGAAGACATGTTCGAGAGCATATTGAGTAAAAGCTATAGCTCATCTCTTGCTGCTGCTCCTAAGATATTTGCCTGTACTGTAGGGCAAAAGCCTAGCAAAGCCAAATACTATTTAGACGATACTGCCGATGTTTTGACCTTGCTTCAAAGCCTGGCCGGCTCTACTAGCCGTAAATCGAGCAAGAGTTTCCGAGATGGGAATGCTTGTTTCGATGAATTCCCTTTTCCTATCCTTTACTTCAAGATCGAACCCGAGATCCTCTACAGAGTCGGGATCATCTCTTCCATTCGAGATTACCCGATTCTTTGCCACAGTCACGGGTGCCAATGGATTCACATTCAGGAAGAACATTGCTTGGCTAGAGTAAGTTGGTTTGATGGTGTAAATAACCACTTTCACGACACTCGTTCTTCGCTTCTCCCGGATTCGAGAGTAGCGGAACAAGATCCATTGGAACCTAGGAATGGGAATTGCGATGCGAATTATTCTTCCGATGGTTTCTCGTTACGAAACATCTTCTTCTTCTCGTTGTTTGTTTATGTTTCTCTCGATACGCCTTCTAGGGTTCTAGTCTTCCATTTCTCCCTTCCGCCATGGCCAACTCCTTTTGCGAGAGAATTAGAGAGCATGAAGACGCCTGAAAATGCGCACTCACCTGCCATTGAGGAACATCGAAGCACCTTTTTTGGATCAGAGAGATGTGGTATTTTGATGATAAACAATGCAAGATTCTTCTCATCTGCACATCAAAATGAGCAGATTCTTGAGCTGGCCCAACACAAGGCCTACCTGTGGAGCCTTTCCAGGTGTAGTCTGCAGTCACACTCAAAAGTTGGTAATGCTTTGCTTTCATATGCCTTCAATGCCGGAGAGCCTCCTCCTTGTGAAGCGGATAAATCCAATTCTCTGTTGCCGGCCACCAGGTGCGGTTGTTTCCGGTTATCGTGCTTCGCATCTCGCCGAACGGCCGCCGGCGGGCCGTCGTGGTGGGAGCGGATTAGGGCATCGCAGGTTCACAGCGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGTTCTTTTGAAGCTCAGAGAGTGGTCGGAGATCGTCGCTGGACCGAGATGGAAGACGTTCATTCGCCGATTTAACCGGAATCGGAGTGGTGGTGGTGCAAAGCCTGGAAAATTCCAATACGATCCGTTGAGTTACGCCATGAATTTCGACGAAGGTTCGAGGGAGATTGGGGAATTGGACGACGACATCGACGATTTCAGCGGGTACCGGAACTTCTCCGCTCGTTACGCTTCGATTCCGGCGCCGCTGAAGACTGGAGGAACCGCCGCATTCGGGAAGGACGTTTCTACCGTCGCGTAA 3696 45.43 MLSSSCLSLLELSSADMLDFPLTPRTVPRVMTASGIFSDKDRDLEVSPSKCRGRKIIVANFLPLHAKKDPDSGKWNFSFDEDSILLQLKDGFSSDVEVIYVGSLKVDVDTREQDEISQKLLEEFNCAPTFIPTSLQKQFYHGFCKQHLWPLFHYMMPISPYHGSRFDRRLWQAYLSANKRFADKVMEVINLEEDYVWVHDYHLMVLPTFLRKRYSRIKLGFFLHSLFPSSEIYRTLPVRDEILKALLNADIIGFHTFDYARHFLSCCSRLLGLEYESKRGYLTLEYFGRTIYIKILPVGVHMGRLEFALNQPHTSIKAKEIKENLKGKKLILGVDDMDIFKGIGLKLLAMEQLLNQHPELQGNVVLVQILHPARSNGNDVLEAKRETYEITKRINETFGFPGYEPVILIDHPIPPHEKIAYYVSAECCIVNALRDGMNLVPYEYIVCRQGTSQMDEVLEVSPNSPRTSTLVVSEFIGCSPSLSGAIRVNPWDFDAVADALYVAVTMPALEKQLRHEKHYRYVSSHNVAYWARSFSQDLERACREHYSKRCWGIGLGLSFRILSLSPSFRKLSIEHIGSAYRSASRRAIFLDYDGTVVSQASLVKTPSPEVISILNNLCTDSNNTVFIVSGRGKDSLGSWFDSCKNLGIAAEHGYYLRWNRDSEWEVSTLAENFGWKSIAEPVMQLYTEATDGSSIEPKDSALVWHHQDADPYFGSCQAMELLDHLENVLANEPVVVKRGQQIVEVKPQGVTKGLVAERVLSTMISSDKAPDFVMCIGDDRSDEDMFESILSKSYSSSLAAAPKIFACTVGQKPSKAKYYLDDTADVLTLLQSLAGSTSRKSSKSFRDGNACFDEFPFPILYFKIEPEILYRVGIISSIRDYPILCHSHGCQWIHIQEEHCLARVSWFDGVNNHFHDTRSSLLPDSRVAEQDPLEPRNGNCDANYSSDGFSLRNIFFFSLFVYVSLDTPSRVLVFHFSLPPWPTPFARELESMKTPENAHSPAIEEHRSTFFGSERCGILMINNARFFSSAHQNEQILELAQHKAYLWSLSRCSLQSHSKVGNALLSYAFNAGEPPPCEADKSNSLLPATRCGCFRLSCFASRRTAAGGPSWWERIRASQVHSEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGAKPGKFQYDPLSYAMNFDEGSREIGELDDDIDDFSGYRNFSARYASIPAPLKTGGTAAFGKDVSTVA 1231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5344654 5352449 - Lag0034221.1 Lac3g0693 601115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0693 1231 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 543 - -
Lac3g0693 1231 NCBIfam trehalose-phosphatase 583 834 IPR003337 GO:0005992(InterPro)
Lac3g0693 1231 CDD HAD_TPP 587 826 - -
Lac3g0693 1231 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 715 846 - -
Lac3g0693 1231 CDD GT20_TPS 54 539 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Lac3g0693 1231 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 585 702 - -
Lac3g0693 1231 FunFam Trehalose-6-phosphate synthase 2 669 748 - -
Lac3g0693 1231 NCBIfam HAD-IIB family hydrolase 587 787 IPR006379 -
Lac3g0693 1231 FunFam Alpha,alpha-trehalose-phosphate synthase 308 523 - -
Lac3g0693 1231 Gene3D Glycogen Phosphorylase B; 307 523 - -
Lac3g0693 1231 SUPERFAMILY HAD-like 586 834 IPR036412 -
Lac3g0693 1231 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 25 835 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Lac3g0693 1231 Pfam Trehalose-phosphatase 589 823 IPR003337 GO:0005992(InterPro)
Lac3g0693 1231 Gene3D - 715 848 IPR023214 -
Lac3g0693 1231 Gene3D - 585 691 IPR023214 -
Lac3g0693 1231 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 47 306 - -
Lac3g0693 1231 Gene3D Glycogen Phosphorylase B; 48 306 - -
Lac3g0693 1231 Pfam Glycosyltransferase family 20 54 539 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0693 Lac-Chr3:5344654 Lac5g0203 Lac-Chr5:1772768 0.00E+00 dispersed
Lac10g0430 Lac-Chr10:3376530 Lac3g0693 Lac-Chr3:5344654 9.20E-36 wgd
Lac13g0218 Lac-Chr13:1552545 Lac3g0693 Lac-Chr3:5344654 0.00E+00 wgd
Lac3g0693 Lac-Chr3:5344654 Lac8g2605 Lac-Chr8:43677374 3.20E-24 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0693 K16055 - csv:101209676 1573.91