Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac3g0695 | ATGCATAACATTGCTTATTCTCGATTGGGCGGCCTTCAAAAATCCCTTTCTCTGTACCGGAAAGTGCCTTGGTGGGATCAAATTCTCGAACCAGATTCCGATTTCGTCATTCGATGGAATCGCATCTTCCTCGTCACTTGCTTGATCGCGCTCTTCGTCGATCCTCTCTACTTCTATGTCTCCGTCATCGGCGGACCTGCTTGTATGCGATTCCAAATTGGACTTTGCATCGTCGTCACTTTCTTCCGCACCGTCGTCGATTTGTTCTCCCTCTTTCATATACTTATGAAGTTTCGCACCGCCTTCGTTGCGCCCAATTCTAGGGTTTTTGGCCGTGGGGAGCTTGTTAAGGAGCCTAGGGATATTGCTATGCGCTACCTCAAGAAGGATTTTGTCATCGATCTTGCCGCTACGCTTCCCCTGCCTCAGATTGTGATTTGGTTCGTGATTCCAGCATTGAAAAACCCAACAGCGACCCATGCTAACCACACCCTTGCTCTGATTGTGCTCATTCAATATGCTCCCCGACTGTTTGTTATATTTCCTATGAACCGACAGATCAATAAGACCACAGGAGCAATAGCCAAAACTGCGTGGGCTGGTGCAGCTTATAATCTCCTACTCTATTTGCTTGCTAGTCATGTTATAGGATCTGCATGGTATGTGGCATCCATTCAGCGCCAGGATGAGTGTTGGAAGTTACAATGTAGGAAGGAGATGAATACCACACATTCTCCTTCTTGCAGCCCCCTTTTTCTGGACTGTGAAAGTTTGAATGATCCAGAACGACAAGCTTGGCTGAGAGTTACTCGTGTTCTTACGAACTGTGATGCGCTAAATGATGAAAGGACTTTTGAGTTTGGGATGTTTGCTGATGCGTTTACTGATGAAGTTGCTTCAGCAAACTTTTTCGAGAAGTACTTCTACTGCCTTTGGTGGGGTTTGAAGAGTTTGAGTGCATATGGACAAAATTTAACGACGAGCACTTATGTTGGTGAAATTTTATTTAGCATTTTGATTTGCTCAGCGGGGTTGGTCCTCTTCTCGCACCTCATAGGACAAGTGCAGAGCTATCTGCAATCCACGACTGCTAGACTTGAGCAATGGAGAGTAAAACGAAGGGACACAGAGGAATGGATGACGCATCGACAATTACCTCTTCATTTGCAAGAGCGCGTTCGTCGATTCGTTCAATATAAATGGATTGCAACTCGAGGTGTAGACGAAGAATCGATCTTGCGCAATTTACCTTTGGATCTTCGACGCCAAATCCAGAGACATCTTTCTCTTGCACTTGTTCGCCGTGTTCCTTTTTTTGCACAAATGGATGCTCAGCTATTGGACGCCATATGCGAGCGTCTAGTCTCATCCTTGAACACTAAAGACACATTCATAACAAGGGAGGGAGATCCAGTAAATGAGATGCTCTTCATCATCAGAGGCCAACTAGAGAGCTCCACAACAAATGGGGGCCGGTCAGGATTCTTCAACTCCATCACTCTCAGACCGGGCGACTTCTGCGGCGAAGAACTACTAACATGGGCCTTAGTCCCATCCCCAAGCCTGAACTTTCCATCCTCGACGCGAACGGTGAAGTCGCTCACCGAAGTCGAGGCATTCGCACTTCGAGCGGAAGATCTCAAGTTTGTAGCTAGCCAGTTCAAGCGCCTCCACAGCAAGAAACTGCAGCATGCTTTCAGATACTATTCCCACCAATGGAGGACATGGGGATCTTGCTTCATACAAGCTGCTTGGAGAAGATATGTGAAAAGAAAGCTAGCTATGGAATTGGCAAGACAAGAGGAGCTCTTTTACGCAACCATCTTGGACCAAGAACAGAGCCAAGGCAGTGAAATGGAAGGCCAAGAAGATGGTGAAACCAGTGGCTCCAAACCTAAAATTGCAAACAAACCCAAACATCTTGGAATAACAATGTTGGCTTCAAAGTTTGCAGCAAACACAAGAAGAGGGATTCACCAGAAGTTGTCTGCGCTTGAATCTGATGCCACCAGCTTGAAAATGCCCAAGCTGTTTAAGCCTGATGAACCAGATTTCTCTGCTTTCCAAGATGGAAGATGA | 2079 | 46.32 | MHNIAYSRLGGLQKSLSLYRKVPWWDQILEPDSDFVIRWNRIFLVTCLIALFVDPLYFYVSVIGGPACMRFQIGLCIVVTFFRTVVDLFSLFHILMKFRTAFVAPNSRVFGRGELVKEPRDIAMRYLKKDFVIDLAATLPLPQIVIWFVIPALKNPTATHANHTLALIVLIQYAPRLFVIFPMNRQINKTTGAIAKTAWAGAAYNLLLYLLASHVIGSAWYVASIQRQDECWKLQCRKEMNTTHSPSCSPLFLDCESLNDPERQAWLRVTRVLTNCDALNDERTFEFGMFADAFTDEVASANFFEKYFYCLWWGLKSLSAYGQNLTTSTYVGEILFSILICSAGLVLFSHLIGQVQSYLQSTTARLEQWRVKRRDTEEWMTHRQLPLHLQERVRRFVQYKWIATRGVDEESILRNLPLDLRRQIQRHLSLALVRRVPFFAQMDAQLLDAICERLVSSLNTKDTFITREGDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALVPSPSLNFPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRRYVKRKLAMELARQEELFYATILDQEQSQGSEMEGQEDGETSGSKPKIANKPKHLGITMLASKFAANTRRGIHQKLSALESDATSLKMPKLFKPDEPDFSAFQDGR | 692 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5380225 | 5383627 | + | Lag0034223.1 | Lac3g0695 | 601117 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac3g0695 | 692 | Gene3D | Jelly Rolls | 436 | 556 | IPR014710 | - | |
Lac3g0695 | 692 | Pfam | Cyclic nucleotide-binding domain | 461 | 550 | IPR000595 | - | |
Lac3g0695 | 692 | SMART | cnmp_10 | 438 | 569 | IPR000595 | - | |
Lac3g0695 | 692 | MobiDBLite | consensus disorder prediction | 675 | 692 | - | - | |
Lac3g0695 | 692 | Pfam | Ion transport protein | 39 | 365 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lac3g0695 | 692 | Gene3D | - | 42 | 362 | - | - | |
Lac3g0695 | 692 | MobiDBLite | consensus disorder prediction | 673 | 692 | - | - | |
Lac3g0695 | 692 | FunFam | Cyclic nucleotide-gated ion channel 1 | 436 | 554 | - | - | |
Lac3g0695 | 692 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 24 | 663 | - | - | |
Lac3g0695 | 692 | SUPERFAMILY | cAMP-binding domain-like | 367 | 563 | IPR018490 | - | |
Lac3g0695 | 692 | CDD | CAP_ED | 438 | 569 | IPR000595 | - | |
Lac3g0695 | 692 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 438 | 568 | IPR000595 | - | |
Lac3g0695 | 692 | SUPERFAMILY | Voltage-gated potassium channels | 31 | 360 | - | - | |
Lac3g0695 | 692 | Gene3D | Helix hairpin bin | 364 | 428 | - | - | |
Lac3g0695 | 692 | MobiDBLite | consensus disorder prediction | 614 | 636 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac3g0695 | Lac-Chr3:5380225 | Lac8g0338 | Lac-Chr8:4106672 | 6.60E-269 | dispersed | |
Lac3g0695 | Lac-Chr3:5380225 | Lac9g2595 | Lac-Chr9:44480023 | 2.90E-208 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac3g0695 | K05391 | - | csv:101209760 | 1213.36 |