Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0695 ATGCATAACATTGCTTATTCTCGATTGGGCGGCCTTCAAAAATCCCTTTCTCTGTACCGGAAAGTGCCTTGGTGGGATCAAATTCTCGAACCAGATTCCGATTTCGTCATTCGATGGAATCGCATCTTCCTCGTCACTTGCTTGATCGCGCTCTTCGTCGATCCTCTCTACTTCTATGTCTCCGTCATCGGCGGACCTGCTTGTATGCGATTCCAAATTGGACTTTGCATCGTCGTCACTTTCTTCCGCACCGTCGTCGATTTGTTCTCCCTCTTTCATATACTTATGAAGTTTCGCACCGCCTTCGTTGCGCCCAATTCTAGGGTTTTTGGCCGTGGGGAGCTTGTTAAGGAGCCTAGGGATATTGCTATGCGCTACCTCAAGAAGGATTTTGTCATCGATCTTGCCGCTACGCTTCCCCTGCCTCAGATTGTGATTTGGTTCGTGATTCCAGCATTGAAAAACCCAACAGCGACCCATGCTAACCACACCCTTGCTCTGATTGTGCTCATTCAATATGCTCCCCGACTGTTTGTTATATTTCCTATGAACCGACAGATCAATAAGACCACAGGAGCAATAGCCAAAACTGCGTGGGCTGGTGCAGCTTATAATCTCCTACTCTATTTGCTTGCTAGTCATGTTATAGGATCTGCATGGTATGTGGCATCCATTCAGCGCCAGGATGAGTGTTGGAAGTTACAATGTAGGAAGGAGATGAATACCACACATTCTCCTTCTTGCAGCCCCCTTTTTCTGGACTGTGAAAGTTTGAATGATCCAGAACGACAAGCTTGGCTGAGAGTTACTCGTGTTCTTACGAACTGTGATGCGCTAAATGATGAAAGGACTTTTGAGTTTGGGATGTTTGCTGATGCGTTTACTGATGAAGTTGCTTCAGCAAACTTTTTCGAGAAGTACTTCTACTGCCTTTGGTGGGGTTTGAAGAGTTTGAGTGCATATGGACAAAATTTAACGACGAGCACTTATGTTGGTGAAATTTTATTTAGCATTTTGATTTGCTCAGCGGGGTTGGTCCTCTTCTCGCACCTCATAGGACAAGTGCAGAGCTATCTGCAATCCACGACTGCTAGACTTGAGCAATGGAGAGTAAAACGAAGGGACACAGAGGAATGGATGACGCATCGACAATTACCTCTTCATTTGCAAGAGCGCGTTCGTCGATTCGTTCAATATAAATGGATTGCAACTCGAGGTGTAGACGAAGAATCGATCTTGCGCAATTTACCTTTGGATCTTCGACGCCAAATCCAGAGACATCTTTCTCTTGCACTTGTTCGCCGTGTTCCTTTTTTTGCACAAATGGATGCTCAGCTATTGGACGCCATATGCGAGCGTCTAGTCTCATCCTTGAACACTAAAGACACATTCATAACAAGGGAGGGAGATCCAGTAAATGAGATGCTCTTCATCATCAGAGGCCAACTAGAGAGCTCCACAACAAATGGGGGCCGGTCAGGATTCTTCAACTCCATCACTCTCAGACCGGGCGACTTCTGCGGCGAAGAACTACTAACATGGGCCTTAGTCCCATCCCCAAGCCTGAACTTTCCATCCTCGACGCGAACGGTGAAGTCGCTCACCGAAGTCGAGGCATTCGCACTTCGAGCGGAAGATCTCAAGTTTGTAGCTAGCCAGTTCAAGCGCCTCCACAGCAAGAAACTGCAGCATGCTTTCAGATACTATTCCCACCAATGGAGGACATGGGGATCTTGCTTCATACAAGCTGCTTGGAGAAGATATGTGAAAAGAAAGCTAGCTATGGAATTGGCAAGACAAGAGGAGCTCTTTTACGCAACCATCTTGGACCAAGAACAGAGCCAAGGCAGTGAAATGGAAGGCCAAGAAGATGGTGAAACCAGTGGCTCCAAACCTAAAATTGCAAACAAACCCAAACATCTTGGAATAACAATGTTGGCTTCAAAGTTTGCAGCAAACACAAGAAGAGGGATTCACCAGAAGTTGTCTGCGCTTGAATCTGATGCCACCAGCTTGAAAATGCCCAAGCTGTTTAAGCCTGATGAACCAGATTTCTCTGCTTTCCAAGATGGAAGATGA 2079 46.32 MHNIAYSRLGGLQKSLSLYRKVPWWDQILEPDSDFVIRWNRIFLVTCLIALFVDPLYFYVSVIGGPACMRFQIGLCIVVTFFRTVVDLFSLFHILMKFRTAFVAPNSRVFGRGELVKEPRDIAMRYLKKDFVIDLAATLPLPQIVIWFVIPALKNPTATHANHTLALIVLIQYAPRLFVIFPMNRQINKTTGAIAKTAWAGAAYNLLLYLLASHVIGSAWYVASIQRQDECWKLQCRKEMNTTHSPSCSPLFLDCESLNDPERQAWLRVTRVLTNCDALNDERTFEFGMFADAFTDEVASANFFEKYFYCLWWGLKSLSAYGQNLTTSTYVGEILFSILICSAGLVLFSHLIGQVQSYLQSTTARLEQWRVKRRDTEEWMTHRQLPLHLQERVRRFVQYKWIATRGVDEESILRNLPLDLRRQIQRHLSLALVRRVPFFAQMDAQLLDAICERLVSSLNTKDTFITREGDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALVPSPSLNFPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRRYVKRKLAMELARQEELFYATILDQEQSQGSEMEGQEDGETSGSKPKIANKPKHLGITMLASKFAANTRRGIHQKLSALESDATSLKMPKLFKPDEPDFSAFQDGR 692
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5380225 5383627 + Lag0034223.1 Lac3g0695 601117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0695 692 Gene3D Jelly Rolls 436 556 IPR014710 -
Lac3g0695 692 Pfam Cyclic nucleotide-binding domain 461 550 IPR000595 -
Lac3g0695 692 SMART cnmp_10 438 569 IPR000595 -
Lac3g0695 692 MobiDBLite consensus disorder prediction 675 692 - -
Lac3g0695 692 Pfam Ion transport protein 39 365 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Lac3g0695 692 Gene3D - 42 362 - -
Lac3g0695 692 MobiDBLite consensus disorder prediction 673 692 - -
Lac3g0695 692 FunFam Cyclic nucleotide-gated ion channel 1 436 554 - -
Lac3g0695 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 24 663 - -
Lac3g0695 692 SUPERFAMILY cAMP-binding domain-like 367 563 IPR018490 -
Lac3g0695 692 CDD CAP_ED 438 569 IPR000595 -
Lac3g0695 692 ProSiteProfiles cAMP/cGMP binding motif profile. 438 568 IPR000595 -
Lac3g0695 692 SUPERFAMILY Voltage-gated potassium channels 31 360 - -
Lac3g0695 692 Gene3D Helix hairpin bin 364 428 - -
Lac3g0695 692 MobiDBLite consensus disorder prediction 614 636 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0695 Lac-Chr3:5380225 Lac8g0338 Lac-Chr8:4106672 6.60E-269 dispersed
Lac3g0695 Lac-Chr3:5380225 Lac9g2595 Lac-Chr9:44480023 2.90E-208 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0695 K05391 - csv:101209760 1213.36