Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0744 ATGGGCGCCACCATTCTTCCAGATCTCGGGGCTGAGATTTTCATTCCGGTATGTGCCATAGTCGGAATCGTCTTCTCTTTGGTCCAGTGGTATTATGTTTCTCAGGTTAAGCTCTCCCCTGGACGAGATTCCGCTCACAACAACTCTGCCGCTGCCAAGAATGGCTACTCCGACTACCTCATCGAGGAGGAAGAGGGCGTCAACGACCACAACGTCGTTATCAAGTGTGCCGAAATTCAGAGCGCCATTTCCGAGGGAGCAACCTCCTTCCTTTTTACCGAGTACAAGTATGTTGGCATCTTTATGGTGTTGTTTGCAGTCTTGATTTTCGTATTCCTTGGCTCAGTGGAGAGTTTTAGTACCAAGCCTCAAGCATGCACATATGACAAAACAAAGATTTGTAAGCCAGCTTTGGCAACGGCTATATTCAGCACTGTATCATTTTTACTTGGTGCAGTTACCTCAGTTATTTCTGGTTTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACTACCTTGGAAGCAAGAAAGGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCTATTAACCTCTTCAAATTGTACTATGGTGATGACTGGGGTGGCCTTTTTGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACAAAAGCTGCTGATGTTGGTGCTGACCTCGTGGGCAAGGTGGAAAGGAACATTCCTGAGGATGATCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTTGGGGATATAGCCGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCGTCCTGTGCTGCTCTCGTAGTTGCTTCTATCTCTTCTTTCGGCAACAACCATGAGTTGACACCAATGCTCTATCCTCTCATCGTCAGCTCTATGGGTATCCTTGTTTGCCTGATCACCACCTTATTTGCAACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTCATAATTTCCACTGTTCTAATGACCTTTGGAATTGCAATTGTTACTTGGTTGGCTGTTCCATCATCATTCACCATTTTCAACTTTGGAACTCAAAAAGAAGTGCAAAACTGGAAACTATTCTTGTGTGTTGCTGTTGGTCTCTGGGCTGGGCTTATAATTGGATTTGTGACAGAGTACTATACGAGCAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCTTGCCGAACTGGAGCTGCTACAAATGTCATTTTTGGGTTGGCATTGGGATACAAATCTGTCATTATCCCTATTTTTGCAATTGCGGTTAGCATTTTTGTGAGTTTCACCTTCGCTGCAATGTACGGCATTGCAGTTGCTGCCCTTGGAATGCTGAGTACAATAGCTACTGGTTTGGCCATTGATGCGTATGGTCCAATCAGTGACAATGCTGGAGGCATTGCTGAGATGGCTGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTTGATGCTGCTGGAAACACCACTGCAGCCATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCTCTTGTGTCTCTTGCCCTTTTCGGTGCCTTTGTCAGCCGAGCCGGCGTCACTGCTGTTGACGTCTTGACACCCAAAGTTTTCATTGGGTTGATCGTGGGTGCTATGCTCCCATACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGTAGTGCAGCCCTAAAGATGGTTGAGGAGGTGCGAAGGCAATTCAACACCATCCCAGGTCTCATGGAGGGTACCGCCAAGCCCGACTATGCCACATGTGTCAAGATCTCAACTGATGCTTCCATCAAAGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACGCCCCTAATTGTCGGTATCCTATTCGGAGTCGAAACTCTTTCTGGTGTCCTTGCTGGATCTCTTGTTTCTGGTGTGCAGATTGCTATCTCTGCATCCAACACCGGAGGTGCCTGGGATAACGCCAAGAAGTACATTGAGGCTGGTGCCTCTGAGCATGCAAGAACCCTCGGCCCCAAAGGATCAGACCCACACAAAGCGGCTGTGATCGGCGACACAATCGGAGACCCGCTCAAGGATACATCAGGACCTTCCCTGAACATTCTGATAAAGTTGATGGCTGTGGAGTCGCTTGTGTTCGCTCCTTTCTTTGCGAGTCACGGAGACTTCCATATTATATGTTCCAAGTCTGTAGCAGCTTTGATTCCCTTTGAGAAACTTGGTGTAGTTTCAAGTGGCAGAGCGTTTTTTACGTTTTCATCGGTTGATGATGATGATGATGATGAAGAAGAAGAAAAGAAGATGTGGGTTGAATGTTGTGAAATGAGACACTTGGATGTTATTCTCTTTTTCCCAATTGAGAACAGGCTATTATTGTTACTCTGTCCCCCTTTTCCTCTTCCTCTTCATCTTCCTCTGTTGTTGAATCCTTAG 2553 46.26 MGATILPDLGAEIFIPVCAIVGIVFSLVQWYYVSQVKLSPGRDSAHNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQSAISEGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVESFSTKPQACTYDKTKICKPALATAIFSTVSFLLGAVTSVISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLIVSSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLAVPSSFTIFNFGTQKEVQNWKLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVTAVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGDFHIICSKSVAALIPFEKLGVVSSGRAFFTFSSVDDDDDDEEEEKKMWVECCEMRHLDVILFFPIENRLLLLLCPPFPLPLHLPLLLNP 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5870933 5875602 - Lag0034272.1 Lac3g0744 601166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0744 850 NCBIfam V-type H(+)-translocating pyrophosphatase 11 761 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lac3g0744 850 PIRSF H+-PPtase 11 766 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lac3g0744 850 Pfam Inorganic H+ pyrophosphatase 74 753 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lac3g0744 850 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 758 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lac3g0744 850 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 761 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0744 Lac-Chr3:5870933 Lac6g2547 Lac-Chr6:43231348 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0744 K23025 - csv:101222673 1420.22