Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0835 ATGGAGGATAAGAAAGCCAACATAGTTTTTCTTCTGTTAATCGTCACCCTCATCCTCATCGTCATTCTTGCTCGAGTTTACCTCAAACTTACCAACGCTTTCTTCCTTATTTGCGGGATCGATGTGTCTCTCATCTCCGCTATCTTGGTCTATATGGTAATCAGAATGCGATTCAACCGGAGAAGAAAACAGCTCCAGTCTCAGTTAAGTTCCGAAGGTCGAGAGCTTCGGATCGAGTACAGTTTCTTAAGGAAGGTCGCCGGAGTTCCCACCAAGTTCCGCTACAAAGAGATCGAGGAAGCCACCGACTATTTCATGTCCTTGATCGGTCAAGGATCCTCCGGTTCGGTCTTCAAAGGAATCCTCAAAGACGGCACTGCCGTCGCCGTCAAGCGGATCGAGGGCGAAAATCGGGGGGAAAAAGAGTTCCGAGCCGAGGTATCCGCCATTGCTAGTGTTCAGCATGTTAATCTCGTTCGTCTACTTGGCTACTGTACCAATTCATCTGGACCTCGATTTCTCGTCTACGAATTCGTTCCAAACGGATCCTTGGATTGCTGGATTTTCCCCAAAAAACCTAGGCACAAGAATCGAAATCGCCCTGGCGGTTGCTTGGCTTGGGATCTGAGATACAGAGTCGCGATTGATGTTGCCAGAGCCCTAGCATACCTTCACCACGATTGCCGATCGAGAATCTTACACCTCGATGTGAAGCCAGAAAACATCCTGCTCGACGAAAATTACAAAGCAATCGTATCGGATTTCGGACTGTCGAAGCTGATGGGGAAAGACGAGAGCCGAATAATGACGTCGATGAGAGGGACGAAGGGGTATTTGGCTCCGGAATGGCTGTTGGAGAATGGAATTTCAGAGAAATCGGACATTTACAGCTACGGAATGGTTCTTCTGGAACTAGTCGGAGGGCAGAGGAACGTGAGCGTAGTTGAAAATGGCGAGGACAAATCTAAGAAAAAATGGCAGTATTTTCCACGAATCGTGAGTGCGAAACTCAGGGAAGGGAAATTAATGGAAGCTGTGGATCAAAGACTCTTGGAAACGGGAACGATCGACGAGAGAGAGGTACGGAAACTGGTTTGTGTGGGTTTGTGGTGCATACAAGAGAACGCGAAGCTGAGGCCAACGATGGCGACGGTGGTGGATATGCTCGAAAGCCGCGTGGCGGTGGAGGAGCCGCCGGACACTCAAATGCTCGTCGTTGATTTGTTGTCGATTGACGAAGAGATGATGAATAGCCATGAGAGGCCGAAGATCGTTGCATTGGGGGAACGGATGAACGACGGCCACGTTCCATCGTCGTCGACGACGTACTCCTACGCCTTTTCAGTACTCTCCCCCCGGTGA 1362 49.63 MEDKKANIVFLLLIVTLILIVILARVYLKLTNAFFLICGIDVSLISAILVYMVIRMRFNRRRKQLQSQLSSEGRELRIEYSFLRKVAGVPTKFRYKEIEEATDYFMSLIGQGSSGSVFKGILKDGTAVAVKRIEGENRGEKEFRAEVSAIASVQHVNLVRLLGYCTNSSGPRFLVYEFVPNGSLDCWIFPKKPRHKNRNRPGGCLAWDLRYRVAIDVARALAYLHHDCRSRILHLDVKPENILLDENYKAIVSDFGLSKLMGKDESRIMTSMRGTKGYLAPEWLLENGISEKSDIYSYGMVLLELVGGQRNVSVVENGEDKSKKKWQYFPRIVSAKLREGKLMEAVDQRLLETGTIDEREVRKLVCVGLWCIQENAKLRPTMATVVDMLESRVAVEEPPDTQMLVVDLLSIDEEMMNSHERPKIVALGERMNDGHVPSSSTTYSYAFSVLSPR 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6669522 6670883 - Lag0034363.1 Lac3g0835 601257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0835 453 Pfam Protein kinase domain 107 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0835 453 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524(InterPro)
Lac3g0835 453 FunFam Putative receptor-like protein kinase 179 397 - -
Lac3g0835 453 Gene3D Transferase(Phosphotransferase) domain 1 179 405 - -
Lac3g0835 453 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 52 415 - -
Lac3g0835 453 FunFam Putative receptor-like protein kinase 70 178 - -
Lac3g0835 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac3g0835 453 Gene3D Phosphorylase Kinase; domain 1 65 178 - -
Lac3g0835 453 CDD STKc_IRAK 109 390 - -
Lac3g0835 453 SUPERFAMILY Protein kinase-like (PK-like) 86 390 IPR011009 -
Lac3g0835 453 ProSiteProfiles Protein kinase domain profile. 103 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac3g0835 453 SMART serkin_6 103 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0835 Lac-Chr3:6669522 Lac8g2242 Lac-Chr8:40707724 3.80E-76 dispersed
Lac3g0835 Lac-Chr3:6669522 Lac6g0634 Lac-Chr6:5385331 1.60E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86073 PF00069 Pkinase 3.70E-45 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0835 - - - 0.0