Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0839 ATGAAGGAGAATCCAGCGGCGGCGCCGGCGCCTTTAGAATCAGTTAAAGTTCCAGTGCTGTGCGCCGTGGTGGTGATTTTATGTGCAAAAATGGCGGTGGCGCTATGGTGGAAGCCGCGGAGAATCGAAGAGCACTTTCTGAGACAAGGAATTCGAGGCCCTCCTTATCGTTTCTTCATCGGTAACTTCAAAGAACTCGTCTCTATGATGCTCGCTGCTTCTTCCCATCCAATGCCCAATTTCTCCCACAATATTCTCCCCCGTGTTCTTTCCTTCTACCATCACTGGAAGAAAATTTACGGTTCGACATTTCTGATCTGGTTCGGACCCATCGTTCGAGTGGCGGTGTCGGACCCGGACATGATCCGAGAAATCTTGACCACCAACTCCGATTTCTACGAGAAGAACGAAGCTCATCCTCTCGTCAAACAGCTCGAAGGGGACGGCCTCCTCACCCTCAAGGATCAAAAATGGGCTCTCCATCGCAAAATCATCTCCCCCACTTTTCACATGGAGAATCTCAAATTGCTGATTCCGGTGGTGGAGGAAAGTGTGGTGGATATGGTCGAGAAATGGTCGGCCATGGCGGACGACACGGCCTCCGGCGAGGTCGAGATCGAAGTTTTCGATTGCTTCCAAACCCTAACGGAAGATGTCATAACAAAAACAGCATTTGGGAGTAGCTATGAAGATGGAAAAGCGATTTTCAAGCTTCAAACTCAACAAATGATATTAGCATCCGAAGCTTTTCAGAAGGTCTTCATTCCTGGCTATAGATTTCTTCCGACAAGAACGAATATCAGTTCGTGGAAATTGGACAAGGAAATAAAGAAATCGTTGATGAAATTGATCGAGGGTCGAAAAGGGAATTCAGAGAAAAATTGGGCAATGGATGAAAAAGGGCCAAAAGATTTATTAGGGCTGATGATTCAAGCTTCCAACTCATCTTCTTGTTCTTCATTAAACAATAATAATATTACCGTCCACGACATTGTTGAAGAGTGCAAAAGCTTCTTCTTTGCTGGCAAACAGACCACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTGGCAATGCATCCACAGTGGCAAATCCAGGCACGTGACGAGGTCCTTAGCGTGTGCGGTCCACGTGCCCTCCCCTCCAGAGATGATGTTTCTAAGTTGAAGATCTTGAGCATGATACTAAACGAGTCCCTACGATTGTACCCGCCCACTGTCGCTACCATTAGACGTGCAAAGGCTGACGTGGAGCTAGGAGGGCGGATGATTCCGCGTGGGACGGAGTTTTTGATTCCAATTCTGGCCGTCCATCACGATCAAAGTATTTGGGGGAATGATGCGAGTGAGTTTAATCCAGGGCGATTCTCAGAAGGAGTGGGTCGTGCTGGAAATCATCCAGCAGGGTTCATTCCGTTTGGACTTGGTGTTCGTACTTGCATTGGCCAAAACTTGGCCCTTTTACAAGCAAAGTTGGCAATGGCAATCATACTTCAACGATTCTCGTTTCGATTGGCTCCCACCTATCAGCATGCACCAACGGTCTTGATGCTTCTTTATCCACAATATGGGGCCCCCATTATTTTTCAAAAGATATCCCAATTCACAGGCGATGCTTCCATGTCATAG 1629 47.39 MKENPAAAPAPLESVKVPVLCAVVVILCAKMAVALWWKPRRIEEHFLRQGIRGPPYRFFIGNFKELVSMMLAASSHPMPNFSHNILPRVLSFYHHWKKIYGSTFLIWFGPIVRVAVSDPDMIREILTTNSDFYEKNEAHPLVKQLEGDGLLTLKDQKWALHRKIISPTFHMENLKLLIPVVEESVVDMVEKWSAMADDTASGEVEIEVFDCFQTLTEDVITKTAFGSSYEDGKAIFKLQTQQMILASEAFQKVFIPGYRFLPTRTNISSWKLDKEIKKSLMKLIEGRKGNSEKNWAMDEKGPKDLLGLMIQASNSSSCSSLNNNNITVHDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPQWQIQARDEVLSVCGPRALPSRDDVSKLKILSMILNESLRLYPPTVATIRRAKADVELGGRMIPRGTEFLIPILAVHHDQSIWGNDASEFNPGRFSEGVGRAGNHPAGFIPFGLGVRTCIGQNLALLQAKLAMAIILQRFSFRLAPTYQHAPTVLMLLYPQYGAPIIFQKISQFTGDASMS 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6698421 6700868 - Lag0034367.1 Lac3g0839 601261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0839 542 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac3g0839 542 Gene3D Cytochrome P450 36 534 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 CDD CYP734 90 526 - -
Lac3g0839 542 Pfam Cytochrome P450 90 511 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 524 IPR050665 GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER)
Lac3g0839 542 SUPERFAMILY Cytochrome P450 83 530 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g0839 542 FunFam Cytochrome P450 734A1 36 533 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0839 Lac-Chr3:6698421 Lac8g2821 Lac-Chr8:45447759 7.80E-92 dispersed
Lac2g0225 Lac-Chr2:1727760 Lac3g0839 Lac-Chr3:6698421 8.60E-120 transposed
Lac2g2843 Lac-Chr2:44657521 Lac3g0839 Lac-Chr3:6698421 8.30E-101 transposed
Lac3g1069 Lac-Chr3:8766346 Lac3g0839 Lac-Chr3:6698421 8.10E-115 transposed
Lac3g2014 Lac-Chr3:23764890 Lac3g0839 Lac-Chr3:6698421 3.60E-82 transposed
Lac3g2151 Lac-Chr3:26961459 Lac3g0839 Lac-Chr3:6698421 7.30E-83 transposed
Lac3g0839 Lac-Chr3:6698421 Lac6g2958 Lac-Chr6:47176422 1.50E-231 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0839 K15639 - csv:101213466 903.664