Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0887 ATGGGTTCGTTCAAAAGTGATCAAAAAGTGAGCTTTGCCGATCCGAGGCCATTTGGGAAGAAGCTGAAATCGGATCTGAAAGAGACGTTTTTCCCCGACGATCCGTTCAGACAGTTTCAGGATGACAGGGCACTGCACCGAGTGAAAAAGGGAGTCCAATATTTCATACCCATATTGGATTGGCTTCCCAAATACAATTTTAATATGTTTAAGTACGATTTGCTTGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCCAAGCTCGCCAGCCTCCCTCCCATCATCGGCCTCTATTCGAGCTTCGTCCCGCCGCTTGTGTACGCGGTGTTTGGGAGCTCGAAGCATCTGGCGGTGGGGACGGTGGCGGCGTGTTCGTTGCTGATAGCTGATATCATCGGAGGCGTGGCGTCGCCGGAGAAAGAACCCACATTGTATCTACACTTGGTTTACACTGCCACCTTCATCACCGGCGTGTTTCAGGCCGCTTTAGGCTTTTTAAGATTGGGAATTTTGGTGGATTTCTTATCGCATTCGACAATCCTTGGGTTCATGGGAGGGACGGCCGTCATCATTTGCCTTCAACAACTCAAAGGCATATTTGGACTCACTCATTTCACTAGCAAAACCGACGTCGTTTCGGTACTCCATGCGGTGATCACCCTTAGATACGAGTGGAAATGGCAAAGTGCAGTGGTGGGCCTCATCTTCCTAATTTTCCTCCAGTTTACTAGGTACCTGAGAAACAGAAACCCGAAGCTATTTTGGGTGTCAGCGATGGCGCCAATGGTGACAGTGATAATCGGATGCTTGTTTGCGTATTTCATCAAAGGAGAAAAACATGGAATCTTAACTGTGGGTCACTTGAGCAAAGGAATAAACCCTATTTCTATTAACTTTTTGAACTTTGACTCAAAATATATATCAGCTGTACTACAAGCTGGCTTGATCACTGGCATGGTGGCTTTGGCTGAAGGAATAGCCATTGGTCGAAGCTTTGCAATAATAAAAAACGAACAAATCGATGGCAACAAAGAGATGGTAGCCTTTGGTTTGATGAACATCGTGGGATCTTTCACTTCTTGCTACTTAACCACTGGGCCATTCTCAAAGACTGCAGTGAACTTCAACGCTGGATGTAGAACAGCAATGTCGAACATAGTAATGGCAGTCTTCATGGCTCTCACCCTCCTTTTTCTAGCTCCTCTTTTCAGCTACACTCCTCTCGTCGCCCTTTCCGCCATTATCATGTCCGCCATGCTTGGTCTGATCAAATATGAAGAAATGTACCATATTTTCATTGTTGACAAGTTCGATTTCTGCATTTGTATGGCGGCTTTCTTGGGCGTTGCTCTGCTGAGCATGGATGTTGGCATCATGCTTTCGGTGGGTCTTGCTTTGCTGAGAGCTCTTCTATACATGGCTAGACCAGCAACTTGCAAGCTTGGGAAAATACCAAACTCCGCTTTGTACAGAGACATGGAGCAGTACCCTGATTCAAACAGAGTCCCTGGAATTATTGTTCTTCAACTTGGTTCTCCTGTCTATTATGCCAACTCCAACTACATCAGAGAAAGGATTTTCAGATGGATTCGTGATGAGCAGGCCATGTTTGGTTCCATAGACGGATCAGTCCAACATGTACTGCTCGAGTTGAGTGGAGTCACATCAATCGACATGACAGGGATTGAAACTCTAGTCGAAATCCGCAGATCGTTACAAGCAATGGGAATTCAGATGGGAATCGTAAACCCAAGAATCGTAGTGATGGAGAAGATGATAGCATCGGAATTCACAGACACGATCGGGAAAGAAAACATCTATTTGTCGGTGGACGATGGAGTGGAAAGGTGCAGGGATACGGTAGTGAAGCCAAAGCAAACAGATGCAAGTGATCGAAGCCCCGATGTGACGACAATGGAGCAGAGGGTATAA 1950 46.36 MGSFKSDQKVSFADPRPFGKKLKSDLKETFFPDDPFRQFQDDRALHRVKKGVQYFIPILDWLPKYNFNMFKYDLLAGITITSLAIPQGISYAKLASLPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADIIGGVASPEKEPTLYLHLVYTATFITGVFQAALGFLRLGILVDFLSHSTILGFMGGTAVIICLQQLKGIFGLTHFTSKTDVVSVLHAVITLRYEWKWQSAVVGLIFLIFLQFTRYLRNRNPKLFWVSAMAPMVTVIIGCLFAYFIKGEKHGILTVGHLSKGINPISINFLNFDSKYISAVLQAGLITGMVALAEGIAIGRSFAIIKNEQIDGNKEMVAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAVFMALTLLFLAPLFSYTPLVALSAIIMSAMLGLIKYEEMYHIFIVDKFDFCICMAAFLGVALLSMDVGIMLSVGLALLRALLYMARPATCKLGKIPNSALYRDMEQYPDSNRVPGIIVLQLGSPVYYANSNYIRERIFRWIRDEQAMFGSIDGSVQHVLLELSGVTSIDMTGIETLVEIRRSLQAMGIQMGIVNPRIVVMEKMIASEFTDTIGKENIYLSVDDGVERCRDTVVKPKQTDASDRSPDVTTMEQRV 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7161697 7166078 - Lag0034415.1 Lac3g0887 601309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0887 649 NCBIfam sulfate permease 57 618 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac3g0887 649 FunFam Sulfate transporter 31 481 626 - -
Lac3g0887 649 PANTHER SULFATE TRANSPORTER 31 624 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Lac3g0887 649 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Lac3g0887 649 Pfam Sulfate permease family 70 451 IPR011547 GO:0016020(InterPro)
Lac3g0887 649 SUPERFAMILY SpoIIaa-like 506 624 IPR036513 -
Lac3g0887 649 Gene3D STAS domain 481 626 IPR036513 -
Lac3g0887 649 Pfam STAS domain 502 618 IPR002645 -
Lac3g0887 649 MobiDBLite consensus disorder prediction 629 649 - -
Lac3g0887 649 CDD STAS_SulP_like_sulfate_transporter 502 616 - -
Lac3g0887 649 ProSiteProfiles STAS domain profile. 501 623 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0887 Lac-Chr3:7161697 Lac7g0709 Lac-Chr7:5711075 2.40E-204 dispersed
Lac3g0887 Lac-Chr3:7161697 Lac4g2856 Lac-Chr4:47177265 7.70E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0887 K17471 - csv:116402148 1092.41