Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g0904 ATGATCGGTTCTTCGATTTCTTCTTCCTCTATCTCCTTCATCATCATCTTCGTTCCAATCTTTATATCCATCTCTCTTTTCCAATTCGGACCCTCTTCCGATCACACCGTTTTCCAAACCCTAACTCGAAACCACTCACCGGTCGATCCGTTTCCGTCCGAGAGCCTCACTGACGGGAATCCAGTCTCGCGGAAGAACTACATTGTTCGCTTCGTTCAATACAGGGAGGCGAAGGACCATCGGTTCTATCTGGAATCGCGTATTAGATCGGGTGGCTGGGAATGGATCGAGAGGCGGAACCCTGCGTCCAAGTATCCAACCGATTTCGGCTTGGTTTCTATCGAGGACTCTGTGAGAGAGAAGCTGGTTGAGGAGATTGACGAATTGGAGCTTGTCAAGGATGTGAATGTAGATGCAAGTCACGTGAGGGGCCTGCTAATGGAGGATGGGGGTAGAGTTGGGGCTTTTGTCGACGGGAAGAAGCGTCCGGGGAAGATCTTCACCTCCATGTCGTTTAATGAAGGAGGTGGGGAACGTTATACGGCAATTAGCAATGCCTCTAATAGATGGGGACGGCACCTGTCGATGCAGAGATCCCAAGTTACCTCATTATTTGGAGCAGAATCTCTTTGGGCAAAAGGGTTTACTGGTTCCAAAGTCAAAATGGCTATATTTGATACTGGTATTCGTGCTAATCACCCACATTTTAGGAATATCAAGGAGCGAACAAATTGGACCAATGAAGATACTTTAAATGATAACCTTGGACATGGGACATTTGTTGCCGGTGTTATTGCAGGTGGAGATGAAGAGTGTCTAGGGTTTGCTCCAGATACGGAGATATATGCTTTTCGTGTGTTTACAGATGCACAGGTGTCATACACTTCATGGTTCCTCGATGCATTCAACTATGCAATTGCTACCAATATGGATGTGTTAAATTTAAGCATTGGTGGACCAGATTACTTAGATCTTCCATTTGTGGAGAAGATTTGGGAAATAACAGCAAATAATATCATCATGGTTTCTGCAATTGGAAATGATGGGCCACTTTACGGGACTTTAAACAACCCTGCAGACCAGAGTGATGTAATTGGTGTTGGTGGTATTGACTACAATGATCATATTGCTTCATTTTCCTCACGTGGCATGACTACTTGGGAGATGCCTCATGGTTATGGTCGTGTGAAGCCAGATGTTGTTGCATATGGTCGGGAAATTATGGGATCCAAAATTAGTACTGGGTGCAAAAGTTTATCAGGCACTAGTGTGGCAAGCCCTGTGGTTGCTGGTGTGGTATGTCTACTTGTTAGTGTCATTCCTGAAGGCCAGCGAAAGGTTATTTTAAATCCAGCTAGCATGAAACAAGCACTTGTTGAGGGAGCTGCGAAGCTTTCTGGTCCTAATTTGTACGAGCAAGGTGCTGGCAGAGTTGATCTATTAGAATCGTATGAAATACTCAAGAGCTACGAACCCCGGGCAAGCATCTTCCCTAGTGTTCTTGACTTTACAGATTGTCCTTATACGTGGCCCTTTTGTCGCCAACCACTTTATGCAGGTGCAATGCCCATCATCTTCAATGCTACCATTTTGAATGGGATGGGTGTAATTGGCTATGTTGAAGGTCAACCAACTTGGCATCCTTTGGATGAAGAAGGAAATCTTTTGAGTATTCACTTCACTTATTCTCAAGTCATCTGGCCTTGGACTGGTTATATTGCACTTCACATGCAAATTAAGGAAGAAGGCGCACAGTTTTCTGGAGAAATTGAGGGCAACGTGACTCTAACAGTATATAGTCCTCCATCAAGAGGAGAGAAGAACCGCCGGACTAGTACTTGTGTGCTACAGCTGAAGTTAAAAGTGGTTCCTACACCTCCAAGATCAAAACGAATTTTATGGGATCAATTTCATAATATCAAATATCCTCCTGGTTATATTCCTAGGGATTCCTTGGATGTACGAAATGACATTCTGGACTGGCATGGAGACCACCTTCACACAAATTTTCATATCATGTTTAACATGTTAAGAGATGCTGGGTACTATGTTGAAGCGCTTGGTTCTCCTCTTACATGCTTTGATGCTCGCCAATATGGGACACTTCTACTAGTGGATCTTGAAGATGAGTACTTCAAAGAGGAAATTGAAAAGTTGAGGGATGATGTTATGATTACTGGCTTGGGATTGGCTGTGTTTTCTGAATGGTATAATGTAGAAACAATGGTAAAGATGAGGTTCTTTGATGATAACACAAGAAGTTGGTGGACTCCAGTTACTGGAGGTGCAAATATTCCTGCACTAAATGATCTTTTAGCCCCATTTGGTATTGCTTTCGGGGATAAGATTTTGAATGGTGATTTTTCTATTGATGGTGAGCAGAGTCGATATGCATCAGGAACAGATATTGTTAGGTTTCCTCAAGGTGGTTATCTGCATAGTTTCCCTTTCGTTGATAGCTCAGAGAGTGGGGCAGCTCAGAGCATACTAACCTCTAGTATGACTAAGGCAGACTTTCCGATTCTTGGTCTATTAGAGGTGGGAGAGGGCCGCATTGCAGTTTATGGAGATTCAAATTGTCTGGATAGCAGCCATATGGTTACAAATTGCTATTGGCTCCTGAGAAAAATATTAGATTTTACCAGTGGAAATATTAAAGATCCGGTGCTCTTCACTAAGTCTTCAAAACGAAATTCACCTCTGTATATAGAAGATAACAAACTACCATCTCGAAGAAGTGATGTAAATTTCTCTACGTATTCTGCTGTTGCTGGAAAGGAATTGATATGCAGGAATGATTCTAGGTTTGATGTATGGGGGACCAAGGGATACAGTATACAGGTCAGGGGAAGAAATAGAAGGTTGCCTGGATTTCCCGTAATTGACTTGGGAAGAGGCTTGAACTCTACTCCAGAAACTTCTTCGATGAGAGGTCCCAAGTTGACTTCAAATGACCGAAATGATACATATGGAAATCGATACTTCAGCTTGTTCTACCGGGATGAGCCTGACATGCCTTTGATTGTTCCTAATCATTGGCTTGTTCCTGCTGTAGTTGCAGTGGCAGGGATTTTGCTCCTTCTGAGTTTTTGGCGGATTAGACAGAAGCGGCGACGGCGACGAAGAGGATCTGGATCAGCACGTCTTTCCAATCTATAG 3159 43.4 MIGSSISSSSISFIIIFVPIFISISLFQFGPSSDHTVFQTLTRNHSPVDPFPSESLTDGNPVSRKNYIVRFVQYREAKDHRFYLESRIRSGGWEWIERRNPASKYPTDFGLVSIEDSVREKLVEEIDELELVKDVNVDASHVRGLLMEDGGRVGAFVDGKKRPGKIFTSMSFNEGGGERYTAISNASNRWGRHLSMQRSQVTSLFGAESLWAKGFTGSKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGGDEECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMTTWEMPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPEGQRKVILNPASMKQALVEGAAKLSGPNLYEQGAGRVDLLESYEILKSYEPRASIFPSVLDFTDCPYTWPFCRQPLYAGAMPIIFNATILNGMGVIGYVEGQPTWHPLDEEGNLLSIHFTYSQVIWPWTGYIALHMQIKEEGAQFSGEIEGNVTLTVYSPPSRGEKNRRTSTCVLQLKLKVVPTPPRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVEALGSPLTCFDARQYGTLLLVDLEDEYFKEEIEKLRDDVMITGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEQSRYASGTDIVRFPQGGYLHSFPFVDSSESGAAQSILTSSMTKADFPILGLLEVGEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSGNIKDPVLFTKSSKRNSPLYIEDNKLPSRRSDVNFSTYSAVAGKELICRNDSRFDVWGTKGYSIQVRGRNRRLPGFPVIDLGRGLNSTPETSSMRGPKLTSNDRNDTYGNRYFSLFYRDEPDMPLIVPNHWLVPAVVAVAGILLLLSFWRIRQKRRRRRRGSGSARLSNL 1052
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7333986 7339628 - Lag0034432.1 Lac3g0904 601326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g0904 1052 PRINTS Subtilisin serine protease family (S8) signature 253 266 IPR015500 -
Lac3g0904 1052 PRINTS Subtilisin serine protease family (S8) signature 217 236 IPR015500 -
Lac3g0904 1052 PRINTS Subtilisin serine protease family (S8) signature 420 436 IPR015500 -
Lac3g0904 1052 Pfam Membrane-bound Site-1 Protease Family N-terminal domain 63 137 - -
Lac3g0904 1052 PANTHER PEPTIDASE S8 40 678 IPR050131 GO:0004252(PANTHER)|GO:0005794(PANTHER)
Lac3g0904 1052 FunFam subtilisin-like protease SBT6.1 189 483 - -
Lac3g0904 1052 CDD Peptidases_S8_SKI-1_like 211 467 IPR034185 -
Lac3g0904 1052 Gene3D Peptidase S8/S53 domain 194 485 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac3g0904 1052 ProSiteProfiles Serine proteases, subtilase domain profile. 193 487 - -
Lac3g0904 1052 ProSitePatterns Serine proteases, subtilase family, histidine active site. 257 267 IPR022398 -
Lac3g0904 1052 ProSitePatterns Serine proteases, subtilase family, serine active site. 421 431 IPR023828 -
Lac3g0904 1052 SUPERFAMILY Subtilisin-like 203 482 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac3g0904 1052 Pfam Subtilase family 217 476 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g0904 K08653 - csv:101222509 1937.92