Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1009 ATGAGGTTACCGTCCTCTGCAATTCTTGTCTTCTTGCACGTCTTTCACCTTCTTCTTTGCTTCGCTACTTTCCCTTCCCTTTCCATCTCCCTCTTAACCGTCACTAAATCCGACTTGGTGCCCGGTGAGATCAATGCTACTTCCGACTCCAACTCCTCGAGATCCGCCAATGATGACCACAGTTTCGCTAACATAATCGATCGGGCTCTCGAGAGGGAATTTACTGAGAATGAGCAGAGTGATGAAGTCGCGGATGCTGGCGGCTTCAACAACAGCGTTGCTGAGAAGCAGGCAGTTTTGGAAACTGTTGCCAGAGTTAAGTCAAAGAAGAATGAATCAAAAGAGGAGAAATCATTTCAGTTCCATGATGTCTTCCATTTAGATAATGAGAATCGACCAGAAGACATGCCCACATTAATTGATCGAAAGGACAATGTCTTCATTATATCAAATCCCAAGTCGAAGTATCCAGTGCTCCAATTGGATTTAAGATTGATTTCGGATCTAGTTGTTGTTATTGTTTCTGCGACTTGTGGTGGCATTGCTTTTGCTTGTGCTGGACAACCGGTCTTTACTGGATACCTGTTGGCTGGATCTCTCATTGGACCCGGGGGTTTAAGCTTTGTCAGTGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTCATCTTCCTTCTTTTTGCATTGGGCTTGGAGTTCTCCACTACAAAACTTCGTGTTGTTCGAGCGGTGGCTGTTCTTGGAGGATTGCTCCAGATTTTCCTTTTTATGTGCCTGTGTGGAATTACCGCTTCGTTATGTGGCGGTAAATCTTCAGAGGGAGTATTTGTTGGTGCATTCCTGTCTATGTCTTCAACTGCAGTGGTCTTGAAATTTTTAATGGAACGAAATAGCGTCAATGCCCTTCATGGGCAGGTGACCATTGGTACTCTTATTCTTCAGGATTGTGCTGTAGGCTTGCTGTTTGCCCTGCTTCCGATTCTTGGTGGTACTTCTGGTGTTCTTCAAGGAGTTCTGTCCATGACTAAGTCGTTGGTGGTCTTGATTACGTTTTTGATTATTTTGACAATATTATCTCGCACATGTGTTCCATGGTTCCTTAAGCTTATGATTAGCCTGTCATCTCAGACTAATGAGCTCTATCAATTGGCAGCTGTTGCATTCTGCTTACTGGTAGCTTGGTGCAGTGATAAACTTGGCTTAAGCCTTGAATTGGGTTCTTTTGCTGCGGGTGTGATGATATCAACTACTGATCTTGCTCAGCACACACTTGAACAGGTTGAGCCCATTCGCAACTTCTTTGCTGCTCTTTTTCTAGCCAGCATTGGGATGCTAATTCATGTTCATTTCCTATGGAACCACATTGATATTTTACTTGCGGCTGTAATATTGGTCATCATTATAAAAACTGTAGTGATTACTACTGTTGTCAAGGGATTTGGATACAACAACAAGACTTCACTTCTGGTTGGGATGTCACTCGCACAAATTGGGGAATTTGCTTTTGTCCTTCTAAGCCGTGCCTCTAATCTTCATCTTGTCGAGGGAAAATTGTATATACTGCTGCTTGGGACAACTGCACTTAGTCTGGTGACTACCCCATTGCTTTTCAAGCTTATTCCTGCTGTGGTACGTATTGGAGTGTTGTTGCGGTGGTTTTCACCTGATGGTTTGAGTGAGATTGGATTCAAAGGAGATGGCTTTCGAACAGATGGTGTCAAGCGCATTGCTTTGGTGGTTCGAGACACTCATGTTTCATGA 1764 43.76 MRLPSSAILVFLHVFHLLLCFATFPSLSISLLTVTKSDLVPGEINATSDSNSSRSANDDHSFANIIDRALEREFTENEQSDEVADAGGFNNSVAEKQAVLETVARVKSKKNESKEEKSFQFHDVFHLDNENRPEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVFTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLCGITASLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPILGGTSGVLQGVLSMTKSLVVLITFLIILTILSRTCVPWFLKLMISLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHIDILLAAVILVIIIKTVVITTVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYILLLGTTALSLVTTPLLFKLIPAVVRIGVLLRWFSPDGLSEIGFKGDGFRTDGVKRIALVVRDTHVS 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8218168 8229771 - Lag0034537.1 Lac3g1009 601431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1009 587 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 48 562 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Lac3g1009 587 Gene3D - 163 546 IPR038770 -
Lac3g1009 587 Pfam Sodium/hydrogen exchanger family 173 539 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1009 Lac-Chr3:8218168 Lac5g2858 Lac-Chr5:46860039 3.00E-182 dispersed
Lac3g1009 Lac-Chr3:8218168 Lac6g0195 Lac-Chr6:1516352 5.80E-234 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1009 K26735 - csv:101208614 1013.83