Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac3g1090 | ATGGGGTCCATGGCTAGATTTCTGATCGCTTCTCTTCTTCTTCTTCTTCTTCTTCCTTGTGTCTTCGTCAATGCCAAGAGAACCTACATTGTTCGCATGAAACATCATGCTCTTCCTTCTGATTATCCGACCCACCATGACTGGTACTCTGCTCATCTTCAATCTCTGTCCTCCTCCACCACTTCTGATTCCCTTCTCTACACCTACACTTCCGCCTACCATGGCTTCGCTGCTTCTCTGGATCCAGAAGAAGCCGAATTGCTCCGCCAATCGGATTCTGTTCTGGGTGTCTATGAGGATACTGTTTACAACCTTCACACCACTCGAACTCCGGGATTCCTTGGGCTCGACTCGGATTTCGGCTTGTGGGAAGGTCACAACACTCAGGATCTCGACCAGGCTTCTCATGATGTCATCATTGGGGTTCTCGACACCGGGATTTGGCCGGAGTCGAAGAGCTTTGATGACACCAGAATGCCAGAGATCCCATCAAGGTGGCGTGGAGAGTGCGAATCTGGACCCGATTTCAGCCCTTCACTCTGCAACAAGAAACTAATCGGAGCTCGCAGCTTCTCGAAGGGTTATCAGATGGCTTCCGGTGGTGGGTACTTCCGAAAACCCAGAGAAAACGAGTCGCCTCGAGACCAGGACGGGCACGGCACTCACACAGCTAGCACGGCTGCTGGGTCGCATGTGGCTAACGCGAGCTTACTTGGGTATGCCAGAGGCATTGCTCGTGGGATGGCTCCTCAAGCGAGAGTTGCGGCTTACAAGACCTGTTGGCCCACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCAATCTCGGACGGTGTCGATGTACTCTCACTCTCTTTAGGTGGTGGCTCTGCGCCGTATTACCGGGATACCATCGCAATCGGAGCTTTTGCGGCCATGGAAAAGGGGGTTTTTGTTTCGTGCTCAGCCGGGAACAGTGGGCCAAACAAGGCCTCTCTGGCGAATGTGGCACCGTGGATCATGACGGTCGGAGCCGGGACTCTGGACCGAGACTTCCCAGCTTATGTCCAACTCGGAAATGGGAAAAGGTTCACTGGAGTGTCACTCTACAGTGGCCAAGGAATGGGGAACAAGCCGGTGGCTTTGGTGTACAACAAAGGAAGCAACACCTCCAGCAACATGTGCTTGCCCGGATCCCTTGAGCCGGCGTTGGTCAGAGGGAAGGTGGTGATCTGCGACAGAGGAATCAACGCCAGAGTAGAGAAGGGAGGAGTGGTGAGAGATGCAGGCGGCATTGGGATGATTCTGGCGAACACAGCCGCTAGTGGGGAGGAATTGGTGGCTGACAGCCACTTGCTGCCGGCCGTGGCGGTGGGGAGGAAAACCGGCGACTTGATCCGGCAGTACGTGCGGTTAGTTTCGAAGCCCACGGCGGTGCTGAGCTTTGGTGGGACAGTTTTGAACGTGCGCCCATCTCCAGTGGTGGCGGCCTTCAGTTCCAGAGGACCCAACTTGGTAACGCCCCAAATCCTAAAGCCTGACGTTATTGGGCCTGGCGTTAACATCTTGGCTGCCTGGTCTGAGTCCATTGGGCCTACTGGACTGGACAGTGACAAGAGGAAAACTCAGTTCAATATTATGTCAGGAACATCCATGTCTTGCCCACATATAAGTGGGCTGGCGGCATTGCTGAAGGCAGCTCATCCTGAATGGAGTCCAAGTGCAATCAAATCTGCGTTAATGACCACTGCATACACGCAGGACAACACCAACTCCTCTCTCAGGGATGCTGCCGGAGGGGCGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCCCACAAAGCCCTCTCCCCTGGTCTTATTTACGATATCTCGACCGATGATTACATTGCCTTCTTGTGCTCCTTGGACTATGGGATCGATCATGTTCAGGCGATTGTGAAGCGCACAAACATAACCTGCTCCAAAAAGTTTGCTGACCCAGGACAACTTAACTACCCTTCATTCTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGATACACTCGTCAAGTCACGAATGTCGGGGCTGCAGGGTCGGTTTATGATGTGGCTACTACTGCTCCATCAGTTGTTAAGGTGATCGTGAAACCCTCAAGGCTTGTGTTCACTAAAGTTGGGGAGAAGAAGAGGTACACTGTTACATTTGTGGCGAGCAGGGATGCTGCTCAAACCATTAGATTTGGATTTGGATCGATTGCATGGAGCAATAACCAACACCAATTTCAGAAAGAAAACAGCAAGAAGTTGATCAACCAGAGTCTGTTCATCAATCAAGCATGGGAAAATTCAGCATTCAGCGTTTGGTTTGCCATTGAGAAGCATAGGTTAGAAGAGTCTGAAAGGGAAAGTTGGGAAGTTCCGGGGATAGTTAACTGA | 2415 | 52.09 | MGSMARFLIASLLLLLLLPCVFVNAKRTYIVRMKHHALPSDYPTHHDWYSAHLQSLSSSTTSDSLLYTYTSAYHGFAASLDPEEAELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHNTQDLDQASHDVIIGVLDTGIWPESKSFDDTRMPEIPSRWRGECESGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKPVALVYNKGSNTSSNMCLPGSLEPALVRGKVVICDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVRLVSKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDSDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLIYDISTDDYIAFLCSLDYGIDHVQAIVKRTNITCSKKFADPGQLNYPSFSVVFGSKRVVRYTRQVTNVGAAGSVYDVATTAPSVVKVIVKPSRLVFTKVGEKKRYTVTFVASRDAAQTIRFGFGSIAWSNNQHQFQKENSKKLINQSLFINQAWENSAFSVWFAIEKHRLEESERESWEVPGIVN | 804 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8997369 | 9000050 | + | Lag0034618.1 | Lac3g1090 | 601512 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac3g1090 | 804 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 28 | 749 | IPR045051 | - | |
Lac3g1090 | 804 | CDD | Peptidases_S8_3 | 103 | 581 | IPR034197 | - | |
Lac3g1090 | 804 | SUPERFAMILY | Subtilisin-like | 105 | 619 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac3g1090 | 804 | Pfam | Fibronectin type-III domain | 662 | 753 | IPR041469 | - | |
Lac3g1090 | 804 | FunFam | Subtilisin-like protease SBT1.9 | 20 | 106 | - | - | |
Lac3g1090 | 804 | FunFam | Subtilisin-like protease SBT1.5 | 137 | 356 | - | - | |
Lac3g1090 | 804 | Gene3D | - | 345 | 483 | - | - | |
Lac3g1090 | 804 | SUPERFAMILY | Protease propeptides/inhibitors | 27 | 105 | - | - | |
Lac3g1090 | 804 | FunFam | subtilisin-like protease SBT1.5 | 345 | 483 | - | - | |
Lac3g1090 | 804 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 23 | 106 | IPR037045 | - | |
Lac3g1090 | 804 | PRINTS | Subtilisin serine protease family (S8) signature | 215 | 228 | IPR015500 | - | |
Lac3g1090 | 804 | PRINTS | Subtilisin serine protease family (S8) signature | 135 | 154 | IPR015500 | - | |
Lac3g1090 | 804 | PRINTS | Subtilisin serine protease family (S8) signature | 544 | 560 | IPR015500 | - | |
Lac3g1090 | 804 | MobiDBLite | consensus disorder prediction | 199 | 226 | - | - | |
Lac3g1090 | 804 | Gene3D | - | 632 | 757 | - | - | |
Lac3g1090 | 804 | Pfam | Subtilase family | 136 | 585 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lac3g1090 | 804 | Pfam | Peptidase inhibitor I9 | 28 | 106 | IPR010259 | - | |
Lac3g1090 | 804 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 119 | 615 | - | - | |
Lac3g1090 | 804 | Pfam | PA domain | 378 | 461 | IPR003137 | - | |
Lac3g1090 | 804 | CDD | PA_subtilisin_like | 351 | 474 | - | - | |
Lac3g1090 | 804 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 545 | 555 | IPR023828 | - | |
Lac3g1090 | 804 | Gene3D | Peptidase S8/S53 domain | 137 | 628 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g2631 | Lac-Chr1:47657902 | Lac3g1090 | Lac-Chr3:8997369 | 4.10E-232 | dispersed | |
Lac3g1090 | Lac-Chr3:8997369 | Lac6g0258 | Lac-Chr6:2099405 | 2.50E-219 | dispersed | |
Lac11g2575 | Lac-Chr11:41803308 | Lac3g1090 | Lac-Chr3:8997369 | 3.40E-181 | transposed | |
Lac3g1090 | Lac-Chr3:8997369 | Lac4g3028 | Lac-Chr4:48453912 | 5.00E-204 | wgd |
Pathway information
