Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1090 ATGGGGTCCATGGCTAGATTTCTGATCGCTTCTCTTCTTCTTCTTCTTCTTCTTCCTTGTGTCTTCGTCAATGCCAAGAGAACCTACATTGTTCGCATGAAACATCATGCTCTTCCTTCTGATTATCCGACCCACCATGACTGGTACTCTGCTCATCTTCAATCTCTGTCCTCCTCCACCACTTCTGATTCCCTTCTCTACACCTACACTTCCGCCTACCATGGCTTCGCTGCTTCTCTGGATCCAGAAGAAGCCGAATTGCTCCGCCAATCGGATTCTGTTCTGGGTGTCTATGAGGATACTGTTTACAACCTTCACACCACTCGAACTCCGGGATTCCTTGGGCTCGACTCGGATTTCGGCTTGTGGGAAGGTCACAACACTCAGGATCTCGACCAGGCTTCTCATGATGTCATCATTGGGGTTCTCGACACCGGGATTTGGCCGGAGTCGAAGAGCTTTGATGACACCAGAATGCCAGAGATCCCATCAAGGTGGCGTGGAGAGTGCGAATCTGGACCCGATTTCAGCCCTTCACTCTGCAACAAGAAACTAATCGGAGCTCGCAGCTTCTCGAAGGGTTATCAGATGGCTTCCGGTGGTGGGTACTTCCGAAAACCCAGAGAAAACGAGTCGCCTCGAGACCAGGACGGGCACGGCACTCACACAGCTAGCACGGCTGCTGGGTCGCATGTGGCTAACGCGAGCTTACTTGGGTATGCCAGAGGCATTGCTCGTGGGATGGCTCCTCAAGCGAGAGTTGCGGCTTACAAGACCTGTTGGCCCACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCAATCTCGGACGGTGTCGATGTACTCTCACTCTCTTTAGGTGGTGGCTCTGCGCCGTATTACCGGGATACCATCGCAATCGGAGCTTTTGCGGCCATGGAAAAGGGGGTTTTTGTTTCGTGCTCAGCCGGGAACAGTGGGCCAAACAAGGCCTCTCTGGCGAATGTGGCACCGTGGATCATGACGGTCGGAGCCGGGACTCTGGACCGAGACTTCCCAGCTTATGTCCAACTCGGAAATGGGAAAAGGTTCACTGGAGTGTCACTCTACAGTGGCCAAGGAATGGGGAACAAGCCGGTGGCTTTGGTGTACAACAAAGGAAGCAACACCTCCAGCAACATGTGCTTGCCCGGATCCCTTGAGCCGGCGTTGGTCAGAGGGAAGGTGGTGATCTGCGACAGAGGAATCAACGCCAGAGTAGAGAAGGGAGGAGTGGTGAGAGATGCAGGCGGCATTGGGATGATTCTGGCGAACACAGCCGCTAGTGGGGAGGAATTGGTGGCTGACAGCCACTTGCTGCCGGCCGTGGCGGTGGGGAGGAAAACCGGCGACTTGATCCGGCAGTACGTGCGGTTAGTTTCGAAGCCCACGGCGGTGCTGAGCTTTGGTGGGACAGTTTTGAACGTGCGCCCATCTCCAGTGGTGGCGGCCTTCAGTTCCAGAGGACCCAACTTGGTAACGCCCCAAATCCTAAAGCCTGACGTTATTGGGCCTGGCGTTAACATCTTGGCTGCCTGGTCTGAGTCCATTGGGCCTACTGGACTGGACAGTGACAAGAGGAAAACTCAGTTCAATATTATGTCAGGAACATCCATGTCTTGCCCACATATAAGTGGGCTGGCGGCATTGCTGAAGGCAGCTCATCCTGAATGGAGTCCAAGTGCAATCAAATCTGCGTTAATGACCACTGCATACACGCAGGACAACACCAACTCCTCTCTCAGGGATGCTGCCGGAGGGGCGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCCCACAAAGCCCTCTCCCCTGGTCTTATTTACGATATCTCGACCGATGATTACATTGCCTTCTTGTGCTCCTTGGACTATGGGATCGATCATGTTCAGGCGATTGTGAAGCGCACAAACATAACCTGCTCCAAAAAGTTTGCTGACCCAGGACAACTTAACTACCCTTCATTCTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGATACACTCGTCAAGTCACGAATGTCGGGGCTGCAGGGTCGGTTTATGATGTGGCTACTACTGCTCCATCAGTTGTTAAGGTGATCGTGAAACCCTCAAGGCTTGTGTTCACTAAAGTTGGGGAGAAGAAGAGGTACACTGTTACATTTGTGGCGAGCAGGGATGCTGCTCAAACCATTAGATTTGGATTTGGATCGATTGCATGGAGCAATAACCAACACCAATTTCAGAAAGAAAACAGCAAGAAGTTGATCAACCAGAGTCTGTTCATCAATCAAGCATGGGAAAATTCAGCATTCAGCGTTTGGTTTGCCATTGAGAAGCATAGGTTAGAAGAGTCTGAAAGGGAAAGTTGGGAAGTTCCGGGGATAGTTAACTGA 2415 52.09 MGSMARFLIASLLLLLLLPCVFVNAKRTYIVRMKHHALPSDYPTHHDWYSAHLQSLSSSTTSDSLLYTYTSAYHGFAASLDPEEAELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHNTQDLDQASHDVIIGVLDTGIWPESKSFDDTRMPEIPSRWRGECESGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKPVALVYNKGSNTSSNMCLPGSLEPALVRGKVVICDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVRLVSKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDSDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLIYDISTDDYIAFLCSLDYGIDHVQAIVKRTNITCSKKFADPGQLNYPSFSVVFGSKRVVRYTRQVTNVGAAGSVYDVATTAPSVVKVIVKPSRLVFTKVGEKKRYTVTFVASRDAAQTIRFGFGSIAWSNNQHQFQKENSKKLINQSLFINQAWENSAFSVWFAIEKHRLEESERESWEVPGIVN 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8997369 9000050 + Lag0034618.1 Lac3g1090 601512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1090 804 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 749 IPR045051 -
Lac3g1090 804 CDD Peptidases_S8_3 103 581 IPR034197 -
Lac3g1090 804 SUPERFAMILY Subtilisin-like 105 619 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac3g1090 804 Pfam Fibronectin type-III domain 662 753 IPR041469 -
Lac3g1090 804 FunFam Subtilisin-like protease SBT1.9 20 106 - -
Lac3g1090 804 FunFam Subtilisin-like protease SBT1.5 137 356 - -
Lac3g1090 804 Gene3D - 345 483 - -
Lac3g1090 804 SUPERFAMILY Protease propeptides/inhibitors 27 105 - -
Lac3g1090 804 FunFam subtilisin-like protease SBT1.5 345 483 - -
Lac3g1090 804 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 106 IPR037045 -
Lac3g1090 804 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Lac3g1090 804 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Lac3g1090 804 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Lac3g1090 804 MobiDBLite consensus disorder prediction 199 226 - -
Lac3g1090 804 Gene3D - 632 757 - -
Lac3g1090 804 Pfam Subtilase family 136 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac3g1090 804 Pfam Peptidase inhibitor I9 28 106 IPR010259 -
Lac3g1090 804 ProSiteProfiles Serine proteases, subtilase domain profile. 119 615 - -
Lac3g1090 804 Pfam PA domain 378 461 IPR003137 -
Lac3g1090 804 CDD PA_subtilisin_like 351 474 - -
Lac3g1090 804 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Lac3g1090 804 Gene3D Peptidase S8/S53 domain 137 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2631 Lac-Chr1:47657902 Lac3g1090 Lac-Chr3:8997369 4.10E-232 dispersed
Lac3g1090 Lac-Chr3:8997369 Lac6g0258 Lac-Chr6:2099405 2.50E-219 dispersed
Lac11g2575 Lac-Chr11:41803308 Lac3g1090 Lac-Chr3:8997369 3.40E-181 transposed
Lac3g1090 Lac-Chr3:8997369 Lac4g3028 Lac-Chr4:48453912 5.00E-204 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1090 - - - 0.0