Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1248 ATGGCGGCGGAGACGGTGACCGTGGCGGCAGTGGCGGTGGCGGTGGCGGTCGTGGCGGCCGGGTGGTTGTTATGTGGTGTTGAGGGTAGACAGCCAGTGTTGCATAGAGTTGGAGGAGGAAAAAACACTTGGACAACTAATATTAACTTCACTGATTGGTCAATTCATGAGCACTTTTATGTTGGTGATTGGCTTTATTTCGGGTTCGATAAACATATCTACAACGTGCTAGAAGTGAACAAAACGAGCTACGAGAATTGCATCGACAAGGATTTCATTTTGAACATAACAAGGGGAGGGAGGGATGTGTTCAACCTAACAGAAGCAAAGCCATACTACTTTCTAAGTGGAGGAGGCTTTTGTTTTCAAGGAATGAAGCTTGCTGTCTTTGTTGAAGATTTTCCCACTTCTTCTCCCATTTCACCACCAAAATTACCCAAAATTTCCAATCTTTCTCCATCTATACAACCATTATTATCTTTGCCCTTCTTGCTACTCACCATTGCTTTCACTTCCTTCCTTTAG 525 44.38 MAAETVTVAAVAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFILNITRGGRDVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPLLSLPFLLLTIAFTSFL 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10658134 10659515 + Lag0034776.1 Lac3g1248 601670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1248 174 Pfam Plastocyanin-like domain 44 125 IPR003245 GO:0009055(InterPro)
Lac3g1248 174 FunFam Lamin-like protein 31 134 - -
Lac3g1248 174 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055(InterPro)
Lac3g1248 174 Gene3D - 33 133 IPR008972 -
Lac3g1248 174 PANTHER BLUE COPPER PROTEIN 16 132 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Lac3g1248 174 SUPERFAMILY Cupredoxins 34 131 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1248 Lac-Chr3:10658134 Lac8g0987 Lac-Chr8:19851211 1.80E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1248 - - - 0.0