Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1269 ATGGTTACCCATGTTCGGAGAAGGGGTTGGGATAATTACTTTGAAGAAGCATTGAAGATGAGAAATCTTCTTGAGGAATTTGGTTGTGATCATGGTATTCGTCCTTCTACCATATTGGGTGTCAGGGAACATGTATTTACGGGGAGTGTTTCATCTCTTGCCTCATTCATGTCTTATCAAGAAGCTAGTTTTGTGACTCTTGGTCAGCGTGTTCTGGCAAATCCCTTGAAAGTGCGTATGCATTATGGCCATCCAGATGTTTTTGATAGGGTTTTCCATCTAACACGAGGTGGCATCAGCAAGGCCTCCCGTGTTATCAACATTAGTGAAGATATCTTTGCAGGATTTAATACAACCTTGCGGCAAGGAAACGTTACTCATCATGAGTATATTCAGGTTGGTAAAGGACGAGATGTTGGTCTTAATCAGATTGCTCTTTTCGAAGGGAAGGTTGCTGGTGGTAATGGAGAACAAGTTCTTAGCCGTGATGTATACAGGCTCGGCCAACTATTTGATTTTTTCCGGATGATGTCATTCTATTTCACCACTGTTGGCTACTACTTTTGTACCATGTTAACTGTGCTGACTGTCTACATTTTTCTCTACGGTAAAGCATATTTGGCATTGTCTGGAGTTGGTGAGACCATTGAAGATAGAGCTAATATTACAGATAATACTGCATTGTCAGCTGCTCTGAATACACAGTTCCTCATCCAAATTGGTATCTTCACTGCTGTGCCCATGATCTTGGGTTTCATATTGGAGCAAGGTTTCTTCAGGGCCATTGTCAGCTTCATAACCATGCAGCTTCAACTTTGTTCTGTCTTCTTCACATTCTCTCTTGGCACAAAAACTCACTATTTTGGCCGAACAATTCTTCATGGTGGTGCGAAGTATCATGCCACTGGAAGGGGATTTGTGGTTCGCCATATCAAATTCTCTGAAAATTACAGACTCTACTCCCGCAGCCATTTTGTCAAAGGATTGGAAGTTGTGCTTCTGTTGGTAGTATACATGGCCTATGGATATAGTTCAGGTGGTTCATTAGCATACATCCTTGTCACTCTTAGCAGTTGGTTCATGGCAATATCTTGGCTTTTTGCTCCCTACCTGTTCAATCCATCTGGGTTTGAGTGGCAAAAGACCGTGGAGGATTTCAGAGAATGGACCAATTGGCTTTTTTACCGTGGTGGAATTGGTGTTAAGGGTGAAGAAAGCTGGGAAGCATGGTGGGACTCAGAACTGGCGCATATAAAAACTTTTGAAGGGCGGATAGCAGAGACTATTTTAAATCTAAGATTTTTTATTTTTCAATATGGCATTGTTTACAAGCTCAATGTGCAAGGATCAAACACATCGTTGTCGGTATATGGGTTCTCCTGGATTGTGTTAGCTGGGCTTATAGTTCTTTTTAAGGTGTTTACCTTTAGTCAGAAGATGACTGTCAATTTCCAGCTTTTGTTGCGTTTTATCCAAGGTCTTTCTTTCCTTTTGGCGCTGGCTGGCCTGGCAGTTGCGGTTGCTATTACAGACTTGTCATTGCCTGATGTATTTGCTTGCATCTTGGCATTTGTACCAACAGGATGGGGCATTCTCTGTATTGCAGCAGCTTGGAAACCTTTGATTAAGAGACTGGGACTCTGGAAATCCATCCGCTCAATTGCTCGGCTGTACGATGCCGGGATGGGGATGCTTGTCTTCATCCCCATTGCATTTCTTTCATGGTTTCCATTTGTATCGACATTCCAAACTCGTCTTATGTTCAACCAGGCTTTCAGTCGAGGGCTCGAGATCTCACTAATTCTTGCTGGAAACAATCCCAACACTGCCCTGTGA 1836 42.76 MVTHVRRRGWDNYFEEALKMRNLLEEFGCDHGIRPSTILGVREHVFTGSVSSLASFMSYQEASFVTLGQRVLANPLKVRMHYGHPDVFDRVFHLTRGGISKASRVINISEDIFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLALSGVGETIEDRANITDNTALSAALNTQFLIQIGIFTAVPMILGFILEQGFFRAIVSFITMQLQLCSVFFTFSLGTKTHYFGRTILHGGAKYHATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLVVYMAYGYSSGGSLAYILVTLSSWFMAISWLFAPYLFNPSGFEWQKTVEDFREWTNWLFYRGGIGVKGEESWEAWWDSELAHIKTFEGRIAETILNLRFFIFQYGIVYKLNVQGSNTSLSVYGFSWIVLAGLIVLFKVFTFSQKMTVNFQLLLRFIQGLSFLLALAGLAVAVAITDLSLPDVFACILAFVPTGWGILCIAAAWKPLIKRLGLWKSIRSIARLYDAGMGMLVFIPIAFLSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTAL 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10902777 10915229 - Lag0034797.1 Lac3g1269 601691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1269 611 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 11 605 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Lac3g1269 611 Pfam 1,3-beta-glucan synthase component 11 425 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0105 Lac-Chr3:730121 Lac3g1269 Lac-Chr3:10902777 1.70E-275 dispersed
Lac3g1269 Lac-Chr3:10902777 Lac9g0212 Lac-Chr9:3254791 2.40E-214 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1269 K11000 - csv:101216435 1179.08