Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1270 ATGTTAGATGAGTGGAAGAACTTTCTTGCTCGAATTGGCCGAGATGAGAATGAAGTTGACCCAGAATCGTTTGATAACACTAATGACATCCTTGCACTCCGATTTTGGGCCTCTTATCGGGGACAGACATTAGCAAGAACTGTTCGTGGAATGATGTACTATCGGAAAGCTCTTATGCTGCAGACTTATCTAGAAAGAGGAATTTATGGAGATTTGGAAGCTGCCATTCCTTTTACTGATGCTATTGATACTCGGGGTTTTGATTTATCTCCTGAAGCACGTGCACAGGCAGATCTTAAGTTTACATATGTAGTAACGTGTCAGATATATGGAAAACAAAGAGAACAACGAAAACCAGAGGCCTCCGATATTGCATTGCTGATGCAAAAAAATGAAGCTCTTCGTGTTGCCTACATTGATGATATTGAAACCCTAAAGGATGGTAAGGTGCACAAAGAATTTTACTCAAAGCTTGTGAAGGCTGATATCAATGGAAAAGATAAGGAGATATATTCCATCAAATTGCCTGGAGATCCAAAATTGGGTGAAGGAAAGCCTGAGAATCAAAATCATGCTATTGTTTTTACTCGTGGAAATGCTGTTCAGACAATTGATATGAATCAGTTTGTGTCTAAGAAGCACGGACACTTTAGTTTCGCTAGCGTGTCTGTGTCCGACACGTGTCGGACACTTGGACACTCCGACACTTGTTGA 714 40.76 MLDEWKNFLARIGRDENEVDPESFDNTNDILALRFWASYRGQTLARTVRGMMYYRKALMLQTYLERGIYGDLEAAIPFTDAIDTRGFDLSPEARAQADLKFTYVVTCQIYGKQREQRKPEASDIALLMQKNEALRVAYIDDIETLKDGKVHKEFYSKLVKADINGKDKEIYSIKLPGDPKLGEGKPENQNHAIVFTRGNAVQTIDMNQFVSKKHGHFSFASVSVSDTCRTLGHSDTC 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10921502 10924902 - Lag0034798.1 Lac3g1270 601692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1270 237 Pfam 1,3-beta-glucan synthase component 27 208 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Lac3g1270 237 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 3 208 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1270 Lac-Chr3:10921502 Lac9g0212 Lac-Chr9:3254791 2.60E-52 dispersed
Lac3g1270 Lac-Chr3:10921502 Lac12g1441 Lac-Chr12:25578289 2.60E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1270 K11000 - csv:101216435 400.979