Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1271 ATGACGCCTAGTTCATCAAGGAATGAGGATTTAGAGTTTGAGGAGAAAGACAAGGAGATTTCGGATAAATATGTTGACAACAACAGAGATGGAAGAGACATCAAGCCTCTTGTTGAACCTACCAGGCTTATTGTAAATATGAGAGATATAACATATTCTTGGCATGACTTTGTGTCTAAAAATAATCATAATGCTTTGACAATTCTTAGCTTATGGGCCCCAGTGGTTGCTATTTACATCTTGGACATTCATGTGTTCTATACTGTTATCTCTGCTATTTGGAGTTTCTTAATTGGGGCAAGAGATCGTCTTGGAGAGATTAGATCACTGGAAGCCGTTCATAAACTGTTTGAGCAGTTTCCTGAAGCTTTTATGAACACTCTACATGTTCCTCTTCCAGAAAGGATTTCTAATCGTTCTTCAAGTCAGGTTGTTGAGAAGGAGAAGTTTGATGCTGCTCGATTTTCTCCCTTCTGGAATGAAATCATAGCAAGTTTACGGGAAGAAGATTATATTACAAACTTGGAAATGGAGTTGCTTCAAATGCCTAAAAACAAGGGTAATCTTCCCATGGTTCAGTGGCCCCTTTTTCTTCTTGCCAGCAAGATATTTCTAGCTAAGGATATTGCTGTTGAGAAACGAGATTCGCAATACGAGTTGTGGGAGCGTATTTCAAGAGATGACTATATGAAATATGCAGTACAGGAATGCTACCATGCAATTAAGCTTATCTTAACAGAATTACTGGTCGGGGAAGGAAGGATGTGGGTTGAAAGAGTATTTGAAGACATTCAAGCTAGCGTAGCTAGCAATTCTATTCAAAATGACTTCCAGCTAAATAAGCTGCCACTTGTGATTACAAGAGTAACGGCTCTGACGGGTATTCTGAAAGAACCAGAAACTTCGGAAATGGAAAAAGGTGCTGTTAAGGCTGTTCAAGATTTGTATGATGTTGTGCACCATGATATCCTTTTCGGTGACAAGAGGGGGCACTACGAAACATGGAACATATTGGTAAAAGCCAGAAATGAAGGTCGCCTGTTCACAAAGTTGAATTGGCCCAAAGATCCAGAATTGAAGGCACAAGTCAAAAGATTGCATTCGCTGTTAACCATTAAAGATTCAGCTTCAAATATTCCAGTTAATCTTGAGGCCAGACGTAGATTGCAATTCTTTACAAATTCACTTTTCATGAGGATGCCAACCCCAAAACCTGTTCGGCAGATGCTTTCCTTCAGTGTATTTACTCCCTATTATTCTGAGACGGTGCTCTATAGCATGGGGGAACTCCTCAAGAAAAATGAGGATGGCATATCAACTTTGTTTTACTTACAAAAAATTTATCCAGCATTAGGAATCGTCTTAGAGAGATTAGAGATTGATTGA 1386 39.18 MTPSSSRNEDLEFEEKDKEISDKYVDNNRDGRDIKPLVEPTRLIVNMRDITYSWHDFVSKNNHNALTILSLWAPVVAIYILDIHVFYTVISAIWSFLIGARDRLGEIRSLEAVHKLFEQFPEAFMNTLHVPLPERISNRSSSQVVEKEKFDAARFSPFWNEIIASLREEDYITNLEMELLQMPKNKGNLPMVQWPLFLLASKIFLAKDIAVEKRDSQYELWERISRDDYMKYAVQECYHAIKLILTELLVGEGRMWVERVFEDIQASVASNSIQNDFQLNKLPLVITRVTALTGILKEPETSEMEKGAVKAVQDLYDVVHHDILFGDKRGHYETWNILVKARNEGRLFTKLNWPKDPELKAQVKRLHSLLTIKDSASNIPVNLEARRRLQFFTNSLFMRMPTPKPVRQMLSFSVFTPYYSETVLYSMGELLKKNEDGISTLFYLQKIYPALGIVLERLEID 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10929629 10941311 - Lag0034799.1 Lac3g1271 601693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1271 461 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 34 449 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Lac3g1271 461 Pfam 1,3-beta-glucan synthase component 379 449 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0106 Lac-Chr3:749620 Lac3g1271 Lac-Chr3:10929629 3.20E-108 dispersed
Lac3g1271 Lac-Chr3:10929629 Lac4g2692 Lac-Chr4:45893282 1.90E-78 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1271 K11000 - csv:101216435 761.14