Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1272 ATGGATGAGAGAATCCCCATCTGGAAGTTTCATATGGTCAGAGAAATGGATGAGATATTGAGGCCTCATGAGATGTCAAGACCGCAGATTGCACAGCCAGCCAAGAGTTGTGTGTCTAAAGATGGTGTTTCTTTCCTTGACCAAGTTATTTGTCCTCTTTACGAGGTTCTGGCTGCGGAAGCTGCAAACAATAATAATGGACGGGCACCGCATTCTGCATGGAGAAACTATGATGATTTTAACGAGTACTTCTGGTCCCTTCGATGCTTCGAACTCAGTTGGCCATGGCATAAAGGCAAATCATTTTTTCAAAAGCCAACACCAAAGTCAAAGAATATGCTTAGTAGAAGTCGTCATCAAGGGAAAACTTCATTTGTTGAGCACCGGACTTTTCTTCATCTTTATCATAGTTTCCACCGTTTATGGATATTTTTGGTTATGATGTTCCAGGCTCTTACCATTGTTGCATTTAACAATGGAAACTTTAATATGGAGACTCTGCTGGAAGTTCTGAGTCTTGGTCCGACATTTGTTGTAATGAAGTTTATTGAGAGTGTCCTAGATATCCTAATGATGTATGGTGCATATTCTACTTCGAGGCGTCTTGCTGTTTCTCGAATTTTTCTTCGTTTCCTTTGGTTCAGTATTGCTTCGGCTTCTGTAACGTTTCTTTATGTGAAAGCTCTTCAGGAGGGGAGTAAACCAAATGCAGAAAGAGTGATGTTCAGACTTTATGTAATTGTGATAGGAATATATGGTGGTGTGCAGCTTTTTCTTAGTATCCTCATGCGTATACCTGCTTGCCATCTTTTAACGAATCAATGTGATCGGTGGCCTCTTATTCGCTTTATCAAGTGGATGCGACAGGAACGGTACTATGTTGGACGTGGGATGTATGAGAGGACTACTGATTTTATCAATCGTTATCTTCCGCCACCGCATGTGTTCAACATCATGGTGGTAGTCATAGGCGTTCAACGCCTCTACTCGTCTGTGGTCGTCATGGGTTTGAAACATGTTTCATAG 1026 41.62 MDERIPIWKFHMVREMDEILRPHEMSRPQIAQPAKSCVSKDGVSFLDQVICPLYEVLAAEAANNNNGRAPHSAWRNYDDFNEYFWSLRCFELSWPWHKGKSFFQKPTPKSKNMLSRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVMMFQALTIVAFNNGNFNMETLLEVLSLGPTFVVMKFIESVLDILMMYGAYSTSRRLAVSRIFLRFLWFSIASASVTFLYVKALQEGSKPNAERVMFRLYVIVIGIYGGVQLFLSILMRIPACHLLTNQCDRWPLIRFIKWMRQERYYVGRGMYERTTDFINRYLPPPHVFNIMVVVIGVQRLYSSVVVMGLKHVS 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10946979 10957252 - Lag0034800.1 Lac3g1272 601694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1272 341 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 11 307 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Lac3g1272 341 SMART FKS1_dom1_2 10 97 IPR026899 -
Lac3g1272 341 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 12 94 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0107 Lac-Chr3:768104 Lac3g1272 Lac-Chr3:10946979 5.80E-82 dispersed
Lac3g1272 Lac-Chr3:10946979 Lac3g1283 Lac-Chr3:11051644 1.90E-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1272 K11000 - csv:101216435 561.222