Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1274 ATGTCAAATGCGAGGGAGATGAGGTATCCCACAATGTACCTTTTAAGTTTTATCTTCTGGGTTCCTCATGCTACTTTGTCCAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAACCATAGATAGAAGCCAGGACATTACTCGGTTACAAGAGTTCTACAAACTATACCGAGAGAAAAATAATGTAGACAAGCTGCGGGAAGATGAAATGAAATTGAGGGAATCTGGTGCTTTCAGTGGTAATCTTGGAGAGTTGGAGCGAAAAACGTTAAAGCGGAAAAAAGTCTTTGCAACCCTAAAAGTATTAGCAATGGTACTGGAGCAACTCAGTGATGCAATCCCTGAAGAGATGAAAAGACTAATGGAATTGGATGCTGCAATGACAGAGGACCTAATTGCATATAATATTATTCCATTAGATGCTCCTTCTATGACAAATGTTATTGGGTCCTTAGCTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAGTATTTTAGCGGCCTTCCAAAGTTGCCTGCAGAATTTTCTATTCCGGAGACCAGGAGTCCTGATATGCTTGACTTTCTACACTTTGTTTTTGGGTTTCAGAAAGACAATGTTTCCAATCAGCGTGAACATGTAGTGCACCTACTTGCCAACGAACAATCTCGCCTTCGTATCCTTGAAGAAACTGAACCAAAATTAGATGAAGCTGCTGTGGAGGGTGTGTTTAAGAAGTCTTTGGAAAACTACATAAAATGGTGTGAATATTTATGCATTCAACCGGTTTGGAGCAGCTTGGCTGCTGTTAGCAAGGAAAAGAAGCTATTGTTTATTTCCTTATACTTCCTTATATGGGGTGAAGCATCCAACGTCAGATTTCTTCCAGAATGTTTATGCTACATATTTCACCATGCTCAAGGCGCACTAAGGCACAATGACCTCCTGGGGCCTAGGCGCAAGGTGTCACAATCGCACTCTTTGAAACATGCAAGTGATTGTGCGGCACTTACTCTCGCCCACGAGTATGTCAGCCAATTCGATCTCAGATCGCCAATGGCACAACGAGCCTATCTGCAACCTCCACCCCCGTTCTTGGAAAACGGTTTTAGAAAACGGGGTTAG 1098 42.99 MSNAREMRYPTMYLLSFIFWVPHATLSKQKLAKREGGTIDRSQDITRLQEFYKLYREKNNVDKLREDEMKLRESGAFSGNLGELERKTLKRKKVFATLKVLAMVLEQLSDAIPEEMKRLMELDAAMTEDLIAYNIIPLDAPSMTNVIGSLAEVQAAVSALKYFSGLPKLPAEFSIPETRSPDMLDFLHFVFGFQKDNVSNQREHVVHLLANEQSRLRILEETEPKLDEAAVEGVFKKSLENYIKWCEYLCIQPVWSSLAAVSKEKKLLFISLYFLIWGEASNVRFLPECLCYIFHHAQGALRHNDLLGPRRKVSQSHSLKHASDCAALTLAHEYVSQFDLRSPMAQRAYLQPPPPFLENGFRKRG 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10963482 10986289 - Lag0034802.1 Lac3g1274 601696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1274 365 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 28 305 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Lac3g1274 365 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 266 304 IPR026899 -
Lac3g1274 365 SMART FKS1_dom1_2 264 345 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1274 Lac-Chr3:10963482 Lac9g0212 Lac-Chr9:3254791 7.20E-33 dispersed
Lac3g1274 Lac-Chr3:10963482 Lac3g1283 Lac-Chr3:11051644 3.50E-35 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1274 K11000 - csv:101216435 499.975