Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1409 ATGGCAGCCAGTGCCCTAGCTCTGTCTTCTTCAACCTTTCTTCTAGCTATTTGCAAAAGCTTCATGGTCTTCTTGACTGGCTCATTCATGGCGGCTGTTCTCATCAGGTTGTTTTCCTATTATGGGAAAAGAAAGCAGTCTGTTGGCACTGCAGCTCTCCCACCCGGCCCGTCTCCGTGGCCTATCGCCGGCTGCCTCCCGACGATATGGCGAAGGAAGCCGAGATACCGATGGATTCACAGCGTCATGGAAGAGCTAAACACCGAAATCGCATGCATCCGTCTTGGCCAAACCCATGTCATTCCTGTGACGTCTCCAGAACTCGCCGTCGAGTTTCTGAAGACGCACGACTCTCTATTTGCGTCGCGACCGATCACCGTTACCACCGACATGTTCAGCGACGGGTTCCTCACCGCAGGCGTCGCGCCGTGGGGAGACCAATGGAGGAAGATGAGAAGAGTCCTCACATCGGAAATCCTCAGTCCAGCTCAACACCGGTGGATGCTCGCAAAGAGAACCGAAGAAGCCGACAATCTCCTACGATACGTGTTCCGTTTAACGACAGCGAACGACGACGACGACGTCGGTGGAGGGGCAGTGGTTAACCTGAGAAGCATAACGCAGCATTATTCGGGGAATGTGATGCGACGAATGATGTTCGATAGGCGATACTACGGCGGAGGAAGAGCGGACGGGGGGCCGGCGGCGGAGGAAGAAGAGCATATCGGAGCATTGTTTACGATTCTTCAACATGTTTACGCAATTTGTGTATCGGATTACATGCCATGTTTGAAGGCGTTTGATTTGGATGGTCACGAGAGGATTGTTAAGAAGGCTTTGAATGTTATTAGAAAGTATGAAGAGCCCATCATTGAGGAGAGAGTGCAGCAATGGAAAGATGGGAGGAGGACGGAGGCTGAGGACATGTTGGATATCTTCATCTCGCTCAAAGATGGCGATGGGAAGCCATTGTTGTCAGTCAGGGAGATTAAAGCACAGATTACGGAACTACTTCTCGCAACAGTGGACAATCCATCGAACGCAGTGGAGTGGGCCATAGCAGAGATGTTAAACCAGCCCCAAATCCTCCAAACCGCCATCGAAGAACTCGACAGAGTCGTCGGAAAACAGCGCCTTGTCCAAGAATCCGACCTCCCAAATCTCAAATTCCTCACCGCCTGCGCCAGAGAGGCCCTCCGCCTCCACCCAATCGCCCCCTTCAACCTCCCTCACATTGCCATCGTCGACGCCGTCGTCGCCGGCTACTTCATCCCCGCCGGCAGCCACGTCCTCCTAAGCCGCCTTGGACTCGGCCGGAACCCTAGGGTTTGGCACGACCCGATGCGATACGATCCGAACAGACATCTCCAAGATCCGGGCGCCGATCCCAACCTAGGGGAGCCCGATCTGAGGTTTATTACATTCACCAGAGGGCGGAGAGGGTGTATGGGCGGCACGCTTGGGACTGCCATTACGATGATGCTGTTGGCTAGGCTTGTGCAGGGATTTTCTTGGCGGTTGCCGCCCGGTGTGGCGGCGATTGACCTGTCAGAGTCTGACCAATTGTTTCTGAAGAATCCTCTGTTCCTGTTTGCAGAGCCGCGACTGCCGGAATCTCTGTACCCTGATTCCGAAACACAAGGGAGAAACTTGTTTTAA 1659 53.89 MAASALALSSSTFLLAICKSFMVFLTGSFMAAVLIRLFSYYGKRKQSVGTAALPPGPSPWPIAGCLPTIWRRKPRYRWIHSVMEELNTEIACIRLGQTHVIPVTSPELAVEFLKTHDSLFASRPITVTTDMFSDGFLTAGVAPWGDQWRKMRRVLTSEILSPAQHRWMLAKRTEEADNLLRYVFRLTTANDDDDVGGGAVVNLRSITQHYSGNVMRRMMFDRRYYGGGRADGGPAAEEEEHIGALFTILQHVYAICVSDYMPCLKAFDLDGHERIVKKALNVIRKYEEPIIEERVQQWKDGRRTEAEDMLDIFISLKDGDGKPLLSVREIKAQITELLLATVDNPSNAVEWAIAEMLNQPQILQTAIEELDRVVGKQRLVQESDLPNLKFLTACAREALRLHPIAPFNLPHIAIVDAVVAGYFIPAGSHVLLSRLGLGRNPRVWHDPMRYDPNRHLQDPGADPNLGEPDLRFITFTRGRRGCMGGTLGTAITMMLLARLVQGFSWRLPPGVAAIDLSESDQLFLKNPLFLFAEPRLPESLYPDSETQGRNLF 552
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 12641445 12644836 - Lag0034937.1 Lac3g1409 601831
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1409 552 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 29 541 IPR051382 -
Lac3g1409 552 Pfam Cytochrome P450 54 527 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 Gene3D Cytochrome P450 48 536 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 FunFam Cytochrome P450 9 46 539 - -
Lac3g1409 552 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1409 552 SUPERFAMILY Cytochrome P450 52 535 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1409 Lac-Chr3:12641445 Lac3g1415 Lac-Chr3:12747938 1.10E-165 dispersed
Lac3g1409 Lac-Chr3:12641445 Lac3g1410 Lac-Chr3:12652694 3.00E-176 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1409 - - - 0.0