Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac3g1410 | ATGGAAGCTTTCTCGTTGATCTCTCAATTGGCATATCAAAACTCTGCAATGCCCATCACCAAAACCTTCATCTTCTTCCTCTTCTTCCTCTTCATCCTCTTCATCCTCTTCATGGCTTCCGTAATTTCTGTCCTTCTTTCTCACCTTAAAAGAAACCACTCGGTTCGACACGTGCCTCTCCCGCTAGGCCCGACGCCGTGGCCGCTCGTCGGCTGCCTCCCAGCAATGTGGAGGAACACGCCGCCACACCGATGGATTCATGCAATAATGAAGCAATACAACACCGAAATTGCTTGCATCCGTCTCGGAAACACCTACATAATCCCCGTCACTTCTCCAGAACTCGCTCTTGAGTTTTTAAAGACGCACGATTCCGTCTTCGCGTCGCGACCTGTCCCTACGACCGCCGACATTCTAACCCGTGGGTTCCTCACCACGGCTCTCTCGCCGTCGGGAGACCAATGGAGGAAGATGCGAAAACTACTTTCCTCGCAAGTGCTCAACCCTTCGACACTTCGTCGAATGTCTGGTCGTAGAACCATCGAAGCCGATGCTCTTCTACGTTACATTTTCAACAAGTCGAGGTCGGGTGGGGCGGCCATCAACTTGAGAAGTGTAACGCAACATTTCTGCGGCAATGTCATCAGGAGAATGTTGTTCGGTAGAAGATACTACGGCGATGATGGCCGGCAAGAAGATAATGGAGGGCCGAGTTTCGAAGAGGAAGAGCACATTCAAGCATTGCTGACGCTGCTTGAGCATGTTCATGCATTTTCTGTATCTGATTACGTGCCTTGTTTGAAGTTGTTTGATTTGGATGGACACAAGAAGACTGTAAAACGAGCTTTGGAAGTGATCAAAAAGCATGATGATTCCATTATAGATGAGAGAGTGCAACAATGGAGAGATGGGAAGAGAAAGGAGGTGGATGATATTCTTGATATTCTCGTCTCGCTTACAGATGAAAATGGAAAATCGCTATTATCAATCGAAGAGATTAAAGCAGAAATCACGGAGTTACAAATGGCAACGATCGACAATCCTTCAAACGCAGTGGAATGGGCAATGGCGGAGTTACTGAACCAACCAAAAATCCTCCAACAAGCAATAGAGGAATTGGATAGGATAGTTGGAAAAGACAGACTTGTTCAAGAATCCGATATCCCACAACTTAAATATCTCATGGCTTGTATCAGAGAATCTTTTCGACTTCATCCATTTTCACCTTTCAATGTGCCTCATGTCTCAAACTCTGATGCCATTGTAGCTGGTTACTTCATTCCCAAAGGCAGCCAAGTCTTGCTGAGTCGTTCGGGACTCGGTCGAAATCCGAGGATCTGGGAGGATCCATTGAGTTACAATCCACAACGTCATCTCAAGGATGAGACAATCGAATTGGGATTATCGGAATCGAGTCTACGCTTCGTTAGCTTCTCTAGAGGGAGAAGAGGTTGCATAGGTAGCTCACTAGGCACAACCATTACCATGATGCTCTTTGCTAGGCTACTACAAGGGTTTTCATGGAGCTTAATGCCTGGAACCACTAAGGTAGACTTCTCTCACTTTGATGATCTCGCCCTTCCAAACCCACTCTACTTGTATGCAGAGCCATGTCTATCTCATAATATGTATCATACTTTAGAAACTAGCTATAGTAAGATAAAAATAGGGTGTTGCCAAAGTGAGCATAGTTAA | 1695 | 45.9 | MEAFSLISQLAYQNSAMPITKTFIFFLFFLFILFILFMASVISVLLSHLKRNHSVRHVPLPLGPTPWPLVGCLPAMWRNTPPHRWIHAIMKQYNTEIACIRLGNTYIIPVTSPELALEFLKTHDSVFASRPVPTTADILTRGFLTTALSPSGDQWRKMRKLLSSQVLNPSTLRRMSGRRTIEADALLRYIFNKSRSGGAAINLRSVTQHFCGNVIRRMLFGRRYYGDDGRQEDNGGPSFEEEEHIQALLTLLEHVHAFSVSDYVPCLKLFDLDGHKKTVKRALEVIKKHDDSIIDERVQQWRDGKRKEVDDILDILVSLTDENGKSLLSIEEIKAEITELQMATIDNPSNAVEWAMAELLNQPKILQQAIEELDRIVGKDRLVQESDIPQLKYLMACIRESFRLHPFSPFNVPHVSNSDAIVAGYFIPKGSQVLLSRSGLGRNPRIWEDPLSYNPQRHLKDETIELGLSESSLRFVSFSRGRRGCIGSSLGTTITMMLFARLLQGFSWSLMPGTTKVDFSHFDDLALPNPLYLYAEPCLSHNMYHTLETSYSKIKIGCCQSEHS | 564 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 12652694 | 12655314 | - | Lag0034938.1 | Lac3g1410 | 601832 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac3g1410 | 564 | Pfam | Cytochrome P450 | 61 | 533 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | SUPERFAMILY | Cytochrome P450 | 53 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | Gene3D | Cytochrome P450 | 46 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 478 | 487 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac3g1410 | 564 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 34 | 543 | IPR051382 | - | |
| Lac3g1410 | 564 | PRINTS | E-class P450 group I signature | 485 | 508 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | E-class P450 group I signature | 115 | 136 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | E-class P450 group I signature | 352 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | E-class P450 group I signature | 436 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | E-class P450 group I signature | 475 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | E-class P450 group I signature | 395 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | P450 superfamily signature | 343 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | P450 superfamily signature | 396 | 407 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | P450 superfamily signature | 485 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g1410 | 564 | PRINTS | P450 superfamily signature | 476 | 485 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac3g1410 | Lac-Chr3:12652694 | Lac3g1415 | Lac-Chr3:12747938 | 5.80E-207 | dispersed | |
| Lac3g1418 | Lac-Chr3:12805083 | Lac3g1410 | Lac-Chr3:12652694 | 1.30E-18 | dispersed | |
| Lac3g1409 | Lac-Chr3:12641445 | Lac3g1410 | Lac-Chr3:12652694 | 3.00E-176 | tandem |
Pathway information