Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1410 ATGGAAGCTTTCTCGTTGATCTCTCAATTGGCATATCAAAACTCTGCAATGCCCATCACCAAAACCTTCATCTTCTTCCTCTTCTTCCTCTTCATCCTCTTCATCCTCTTCATGGCTTCCGTAATTTCTGTCCTTCTTTCTCACCTTAAAAGAAACCACTCGGTTCGACACGTGCCTCTCCCGCTAGGCCCGACGCCGTGGCCGCTCGTCGGCTGCCTCCCAGCAATGTGGAGGAACACGCCGCCACACCGATGGATTCATGCAATAATGAAGCAATACAACACCGAAATTGCTTGCATCCGTCTCGGAAACACCTACATAATCCCCGTCACTTCTCCAGAACTCGCTCTTGAGTTTTTAAAGACGCACGATTCCGTCTTCGCGTCGCGACCTGTCCCTACGACCGCCGACATTCTAACCCGTGGGTTCCTCACCACGGCTCTCTCGCCGTCGGGAGACCAATGGAGGAAGATGCGAAAACTACTTTCCTCGCAAGTGCTCAACCCTTCGACACTTCGTCGAATGTCTGGTCGTAGAACCATCGAAGCCGATGCTCTTCTACGTTACATTTTCAACAAGTCGAGGTCGGGTGGGGCGGCCATCAACTTGAGAAGTGTAACGCAACATTTCTGCGGCAATGTCATCAGGAGAATGTTGTTCGGTAGAAGATACTACGGCGATGATGGCCGGCAAGAAGATAATGGAGGGCCGAGTTTCGAAGAGGAAGAGCACATTCAAGCATTGCTGACGCTGCTTGAGCATGTTCATGCATTTTCTGTATCTGATTACGTGCCTTGTTTGAAGTTGTTTGATTTGGATGGACACAAGAAGACTGTAAAACGAGCTTTGGAAGTGATCAAAAAGCATGATGATTCCATTATAGATGAGAGAGTGCAACAATGGAGAGATGGGAAGAGAAAGGAGGTGGATGATATTCTTGATATTCTCGTCTCGCTTACAGATGAAAATGGAAAATCGCTATTATCAATCGAAGAGATTAAAGCAGAAATCACGGAGTTACAAATGGCAACGATCGACAATCCTTCAAACGCAGTGGAATGGGCAATGGCGGAGTTACTGAACCAACCAAAAATCCTCCAACAAGCAATAGAGGAATTGGATAGGATAGTTGGAAAAGACAGACTTGTTCAAGAATCCGATATCCCACAACTTAAATATCTCATGGCTTGTATCAGAGAATCTTTTCGACTTCATCCATTTTCACCTTTCAATGTGCCTCATGTCTCAAACTCTGATGCCATTGTAGCTGGTTACTTCATTCCCAAAGGCAGCCAAGTCTTGCTGAGTCGTTCGGGACTCGGTCGAAATCCGAGGATCTGGGAGGATCCATTGAGTTACAATCCACAACGTCATCTCAAGGATGAGACAATCGAATTGGGATTATCGGAATCGAGTCTACGCTTCGTTAGCTTCTCTAGAGGGAGAAGAGGTTGCATAGGTAGCTCACTAGGCACAACCATTACCATGATGCTCTTTGCTAGGCTACTACAAGGGTTTTCATGGAGCTTAATGCCTGGAACCACTAAGGTAGACTTCTCTCACTTTGATGATCTCGCCCTTCCAAACCCACTCTACTTGTATGCAGAGCCATGTCTATCTCATAATATGTATCATACTTTAGAAACTAGCTATAGTAAGATAAAAATAGGGTGTTGCCAAAGTGAGCATAGTTAA 1695 45.9 MEAFSLISQLAYQNSAMPITKTFIFFLFFLFILFILFMASVISVLLSHLKRNHSVRHVPLPLGPTPWPLVGCLPAMWRNTPPHRWIHAIMKQYNTEIACIRLGNTYIIPVTSPELALEFLKTHDSVFASRPVPTTADILTRGFLTTALSPSGDQWRKMRKLLSSQVLNPSTLRRMSGRRTIEADALLRYIFNKSRSGGAAINLRSVTQHFCGNVIRRMLFGRRYYGDDGRQEDNGGPSFEEEEHIQALLTLLEHVHAFSVSDYVPCLKLFDLDGHKKTVKRALEVIKKHDDSIIDERVQQWRDGKRKEVDDILDILVSLTDENGKSLLSIEEIKAEITELQMATIDNPSNAVEWAMAELLNQPKILQQAIEELDRIVGKDRLVQESDIPQLKYLMACIRESFRLHPFSPFNVPHVSNSDAIVAGYFIPKGSQVLLSRSGLGRNPRIWEDPLSYNPQRHLKDETIELGLSESSLRFVSFSRGRRGCIGSSLGTTITMMLFARLLQGFSWSLMPGTTKVDFSHFDDLALPNPLYLYAEPCLSHNMYHTLETSYSKIKIGCCQSEHS 564
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 12652694 12655314 - Lag0034938.1 Lac3g1410 601832
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1410 564 Pfam Cytochrome P450 61 533 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 SUPERFAMILY Cytochrome P450 53 536 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 Gene3D Cytochrome P450 46 530 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 478 487 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac3g1410 564 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 34 543 IPR051382 -
Lac3g1410 564 PRINTS E-class P450 group I signature 485 508 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS E-class P450 group I signature 475 485 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS P450 superfamily signature 485 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac3g1410 564 PRINTS P450 superfamily signature 476 485 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1410 Lac-Chr3:12652694 Lac3g1415 Lac-Chr3:12747938 5.80E-207 dispersed
Lac3g1418 Lac-Chr3:12805083 Lac3g1410 Lac-Chr3:12652694 1.30E-18 dispersed
Lac3g1409 Lac-Chr3:12641445 Lac3g1410 Lac-Chr3:12652694 3.00E-176 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1410 - - - 0.0